Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21]
3,985 sequences; 11,595,011 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq2084 89.7 8e-12
>seq2084
Length=1521
Score = 89.7 bits (98), Expect = 8e-12
Identities = 219/331 (66%), Gaps = 17/331 (5%)
Strand=Plus/Minus
Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399
||||||||| | | ||||| ||||||| ||| | |||||||| | || | ||
Sbjct 902 ACCTTCGTCTCTGCAGATCAGTTCGTTGGAGAAGGTCAAACCGGGCATCATACCTCTTTT 843
Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459
||| | ||| ||||||| ||| || || || |||| || |||| || ||| ||
Sbjct 842 CTTCAACCAGAAGATGGAGGCGAAGGACCCGGAAAAGAAGACACCTTCGATGGAGGCGAA 783
Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTT---GATCCACTTCATCGC 794516
|||| || | || | || |||| | || || |||||| | | ||
Sbjct 782 CGCGACCAGTCTTTCACCGAA------CAGGGCATCGGCGTCCTGGATCCATCTAAGGGC 729
Query 794517 CCACTCTGCCTTTTTCCTCACCGAG----GGCACCGTGTCGATGGCGCGAAAGAGGTGGT 794572
||| || ||||| ||| | || || | |||||||||||| || | | |
Sbjct 728 CCATTCGGCCTT----CTCGCAGATTTCTGGGATGGTGTCGATGGCGTTGAACAAGAACT 673
Query 794573 CCTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGA 794632
| | || |||||||||| |||||||||||| | | |||||||| || |||||||
Sbjct 672 CGCTTTCCTTGGGGTCCTTGATGTAGGTGTCGATCAACAAGGAGTAGGTTTCGGAGTGGA 613
Query 794633 TGTTTTCGATGGCGATCTGGAAGCCATAAAA 794663
|||| ||||| ||||||||||| || || ||
Sbjct 612 TGTTCTCGATTGCGATCTGGAACCCGTAGAA 582
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7915822497374415
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |