Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21]
3,985 sequences; 11,595,011 total letters
Query= NC_023611.1
Length=198533
Score E
Sequences producing significant alignments: (Bits) Value
seq131 91.5 2e-13
seq1165 87.8 2e-12
seq203 82.4 1e-10
seq4 82.4 1e-10
>seq131
Length=11630
Score = 91.5 bits (100), Expect = 2e-13
Identities = 150/214 (70%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 168527 AGAACTTTTATGGGTTATAAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTGT 168586
|||| | |||||| || || ||| | || ||| | || | ||| ||| ||||||
Sbjct 8775 AGAATTATTATGGTTTGTAGCCGGTGCTACAGATGCTAATCTCTTATCTGAGCAAGGTGT 8834
Query 168587 TAAAGTTTGGAACGATAATGGTTCTCGTGAATTTTTAGATTTATGTGGTTTTACCGAAAG 168646
||| | ||| ||| |||||| |||||||||| || ||| ||| | || || ||
Sbjct 8835 AAAAATCTGGGACGGTAATGGGTCTCGTGAATACTTGGATAAGATTGGGCTCACGGATAG 8894
Query 168647 AAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATA 168706
||||| ||| || | || || ||||||| || |||||||||||| || || |||||
Sbjct 8895 AAAAGTAGGAGACCTGGGCCCCGTTTATGGGTTCCAATGGAGACATTTCGGTGCCCAATA 8954
Query 168707 TATTGAC-TGTGATACAGATTACACCGGACAAGG 168739
| ||| || ||| || || |||||||||||
Sbjct 8955 CA-AGACGTGCGATGATGACTATACCGGACAAGG 8987
>seq1165
Length=3371
Score = 87.8 bits (96), Expect = 2e-12
Identities = 123/173 (71%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 51867 ATGGATGGTGATGATGTACTATTAAATAGGCAACCAACACTTCATAAAGCTTCTATGCAA 51926
|||||| |||| || ||||| || | ||||| | ||||||||| ||||||
Sbjct 1918 ATGGATAATGATCCAGTTCTATTCAACCGTCAACCTTCGCTTCATAAAATGTCTATGATG 1859
Query 51927 AGTTTTAAAGTTAAAATTCAACCAGTAAAAACATTTAAAATGAATTTGGCTATGACTAAA 51986
| || ||| ||| || ||| ||||| | | |||||||| || | |||
Sbjct 1858 GCTCATAGAGTGAAAGTTATTCCATATTCTACATTCAGATTGAATTTGTCTGTCACTTCT 1799
Query 51987 GCATATAATGCTGATTTTGATGGGGATGAAATGAATTTACATGTTCCTCAATC 52039
||||||| || ||||||||||| |||||||||||| | ||||||||||||||
Sbjct 1798 CCATATAACGCCGATTTTGATGGTGATGAAATGAATCTTCATGTTCCTCAATC 1746
>seq203
Length=9829
Score = 82.4 bits (90), Expect = 1e-10
Identities = 108/147 (73%), Gaps = 2/147 (1%)
Strand=Plus/Plus
Query 193446 CCTGAAATAGGGGATAAATTTTGTTCAGGA-ATGGCCCAAAAAGGAACTTGTGGTATGAT 193504
||| |||| || || ||||| ||| | |||| | |||| || ||| |||||| |
Sbjct 9123 CCTCAAATCGGTGACAAATTCGCTTCTCGTCATGGTC-AAAAGGGTACTATTGGTATCAC 9181
Query 193505 TTATTCACAAGAAGATATGCCATTTACAGCTTCAGGTATGGTACCAGATATTATTATTAA 193564
||| ||||||||||||||||||||| |||||| ||||||||| | ||||| ||
Sbjct 9182 ATATCGTAGAGAAGATATGCCATTTACAGCAGAAGGTATCGTACCAGATTTAATTATCAA 9241
Query 193565 TCCAAATTGTATTCCATCCAGAATGAC 193591
||| || ||||||||| | |||||
Sbjct 9242 TCCTCATGCTATTCCATCTCGTATGAC 9268
>seq4
Length=23134
Score = 82.4 bits (90), Expect = 1e-10
Identities = 108/147 (73%), Gaps = 2/147 (1%)
Strand=Plus/Plus
Query 193446 CCTGAAATAGGGGATAAATTTTGTTCAGGA-ATGGCCCAAAAAGGAACTTGTGGTATGAT 193504
|||||| | || || ||||||| ||| || |||| | |||| || ||||||||| ||
Sbjct 16813 CCTGAACTGGGAGACAAATTTTCATCAAGACATGGAC-AAAAGGGTGTTTGTGGTATTAT 16871
Query 193505 TTATTCACAAGAAGATATGCCATTTACAGCTTCAGGTATGGTACCAGATATTATTATTAA 193564
| ||||||||||||||| || | | | |||||| || |||||||||||||| ||
Sbjct 16872 TGTCAAACAAGAAGATATGCCTTTCAATGATCAAGGTATTGTGCCAGATATTATTATGAA 16931
Query 193565 TCCAAATTGTATTCCATCCAGAATGAC 193591
|| | || | |||||| | |||||
Sbjct 16932 CCCTCACGGTTTCCCATCCCGTATGAC 16958
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635145960215800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |