Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21] 3,985 sequences; 11,595,011 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq131 87.8 2e-12 >seq131 Length=11630 Score = 87.8 bits (96), Expect = 2e-12 Identities = 234/355 (66%), Gaps = 2/355 (1%) Strand=Plus/Plus Query 171612 AGAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTGT 171671 |||| | |||||| || | ||| | || ||| | || | ||| ||| |||||| Sbjct 8775 AGAATTATTATGGTTTGTAGCCGGTGCTACAGATGCTAATCTCTTATCTGAGCAAGGTGT 8834 Query 171672 TAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGAAAG 171731 ||| | ||| | | |||||| |||||||||| || ||| ||| | || || || Sbjct 8835 AAAAATCTGGGACGGTAATGGGTCTCGTGAATACTTGGATAAGATTGGGCTCACGGATAG 8894 Query 171732 AAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAATA 171791 ||||| ||| || | || || ||||||| || |||||||||||| || || ||||| Sbjct 8895 AAAAGTAGGAGACCTGGGCCCCGTTTATGGGTTCCAATGGAGACATTTCGGTGCCCAATA 8954 Query 171792 TATCGAC-TGTTATACAGATTACACAGGACAAGGAGTGGACCAATTAAGTCAAACTATTA 171850 | ||| || || || || || |||||||| | || || | | || ||| Sbjct 8955 CA-AGACGTGCGATGATGACTATACCGGACAAGGCATCGATCAGCTGAAGCAGGTTATAC 9013 Query 171851 ATACTTTACAAAACAACCCAGAAAGTAGAAGGATGTTAATTGATAGTTGGAATGTACCTC 171910 | | ||| ||| ||||| | ||||||||| | || | ||||||| | Sbjct 9014 ACAAATTAAAAACAAACCCTTACGATAGAAGGATCATCATGAGTGCTTGGAATCCTGCAG 9073 Query 171911 AACTTGATAAAATGGTTCTTCCTCCTTGCCACACTTTAGCACAATTTTATGTCAG 171965 | |||| || |||| | | || || ||||| | ||| |||| ||||||||||| Sbjct 9074 ATTTTGACAAGATGGCTTTACCACCATGCCATATTTTTTCACAGTTTTATGTCAG 9128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628499891289600