Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21]
3,985 sequences; 11,595,011 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq1165 123 6e-23
seq1567 107 5e-18
seq2673 91.5 3e-13
>seq1165
Length=3371
Score = 123 bits (136), Expect = 6e-23
Identities = 155/210 (74%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 305318 GACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCT 305377
|| |||||| ||||| ||||| | ||||| || || |||||||||||||||||||||
Sbjct 1915 GATAATGATCCAGTTCTATTCAACCGTCAACCTTCGCTTCATAAAATGTCTATGATGGCT 1856
Query 305378 CATAAAGTCAAAGTATTATCTGGATT-GACATTTCGATTAAATGTAAGTGCTTGTACGCC 305436
|||| ||| ||||| | || ||| ||||| |||| ||| | || | | ||
Sbjct 1855 CATAGAGTGAAAGT-TATTCCATATTCTACATTCAGATTGAATTTGTCTGTCACTTCTCC 1797
Query 305437 TTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAATCAAAGGTTAC 305496
||||| || ||||||||||| |||||||||||| | ||||| |||||||| ||| ||
Sbjct 1796 ATATAACGCCGATTTTGATGGTGATGAAATGAATCTTCATGTTCCTCAATCTGAGGAGAC 1737
Query 305497 AATGACTGAATTATCAGAAATATGTTCTGT 305526
|| | ||| |||| | ||||| ||||
Sbjct 1736 AAGAGCGGAACTATCCCAGTTATGTGCTGT 1707
>seq1567
Length=2367
Score = 107 bits (118), Expect = 5e-18
Identities = 263/398 (66%), Gaps = 3/398 (1%)
Strand=Plus/Minus
Query 110511 CAATTGGCTTCTTGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGAT 110570
||| || ||||||| || || | | || || || || || |||||||||||||| ||
Sbjct 1635 CAAATGTCTTCTTGTTTCCTGATTGCCATGAAGGACGACTCCATTGAAGGTATTTACGAC 1576
Query 110571 GCTCTTAAAGAAACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCAT 110630
|| | ||||| ||| | ||||| || | | || || ||||| |||| | |
Sbjct 1575 ACTTTGAAAGAGTGTGCCATGATTTCCAAGACTGCAGGTGGTGTTGGTCTTCATATCAAC 1516
Query 110631 GATATTCGCTCAAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTT 110690
||||||| || | ||| | |||| ||| | || ||| |||||| || | ||
Sbjct 1515 AATATTCGTTCCACAGGCTCTTATATTGCAGGTACCAACGGTACTTCAAACGGGTTGATT 1456
Query 110691 CCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGT---AAGAGA 110747
|| ||| | | ||||||||| |||||||| || ||| | ||||||||| ||||||
Sbjct 1455 CCCATGATCCGTGTCTTCAACAACACTGCACGTTACGTGGACCAAGGTGGTAACAAGAGA 1396
Query 110748 AATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAA 110807
|| | ||||| | | | || || |||||| |||| || || || || | ||
Sbjct 1395 CCCGGTGCCTTTGCCCTTTTCTTGGAGCCATGGCATGCAGACATCTTCGACTTTGTCGAT 1336
Query 110808 CTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGG 110867
| | || | ||| || |||||| | ||| | ||||| || ||| | |||
Sbjct 1335 ATCAGAAAGACTCATGGTAAGGAAGAAATTCGTGCAAGAGATTTGTTCCCTGCTCTATGG 1276
Query 110868 ATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGG 110905
||| | ||| | |||||||| ||||| |||| ||||
Sbjct 1275 ATTCCCGATCTTTTCATGAAGCGTGTCGAAGAGGATGG 1238
>seq2673
Length=843
Score = 91.5 bits (100), Expect = 3e-13
Identities = 97/128 (76%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 167616 GCAGCAATAGACATAGTGTCAAAAACATCGATGAAACTTTTCCAGATTTTTATCGAACCA 167675
||||| | || || ||||| || |||||||| ||||||||||| | || || |
Sbjct 801 GCAGCTAGAGGCAGAGTGTTGAAGGTGTCGATGAACGTTTTCCAGATTCTGATATTACAA 742
Query 167676 CGTCGTTTGCATTCATCGTAAAAACCATAGTCTCTTGAGATATCAGCACATTCGTGATTT 167735
|||||||| |||||||| ||||| ||||| |||||| | || ||||||||||| ||
Sbjct 741 CGTCGTTTACATTCATCATAAAATCCATAAACTCTTGTTACATTGGCACATTCGTGGTTA 682
Query 167736 CCTCTTAA 167743
||||| ||
Sbjct 681 CCTCTCAA 674
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186752203934585
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |