Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21] 3,985 sequences; 11,595,011 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq1165 123 6e-23 seq1567 107 5e-18 seq2673 91.5 3e-13 >seq1165 Length=3371 Score = 123 bits (136), Expect = 6e-23 Identities = 155/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 305318 GACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCT 305377 || |||||| ||||| ||||| | ||||| || || ||||||||||||||||||||| Sbjct 1915 GATAATGATCCAGTTCTATTCAACCGTCAACCTTCGCTTCATAAAATGTCTATGATGGCT 1856 Query 305378 CATAAAGTCAAAGTATTATCTGGATT-GACATTTCGATTAAATGTAAGTGCTTGTACGCC 305436 |||| ||| ||||| | || ||| ||||| |||| ||| | || | | || Sbjct 1855 CATAGAGTGAAAGT-TATTCCATATTCTACATTCAGATTGAATTTGTCTGTCACTTCTCC 1797 Query 305437 TTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAATCAAAGGTTAC 305496 ||||| || ||||||||||| |||||||||||| | ||||| |||||||| ||| || Sbjct 1796 ATATAACGCCGATTTTGATGGTGATGAAATGAATCTTCATGTTCCTCAATCTGAGGAGAC 1737 Query 305497 AATGACTGAATTATCAGAAATATGTTCTGT 305526 || | ||| |||| | ||||| |||| Sbjct 1736 AAGAGCGGAACTATCCCAGTTATGTGCTGT 1707 >seq1567 Length=2367 Score = 107 bits (118), Expect = 5e-18 Identities = 263/398 (66%), Gaps = 3/398 (1%) Strand=Plus/Minus Query 110511 CAATTGGCTTCTTGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGAT 110570 ||| || ||||||| || || | | || || || || || |||||||||||||| || Sbjct 1635 CAAATGTCTTCTTGTTTCCTGATTGCCATGAAGGACGACTCCATTGAAGGTATTTACGAC 1576 Query 110571 GCTCTTAAAGAAACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCAT 110630 || | ||||| ||| | ||||| || | | || || ||||| |||| | | Sbjct 1575 ACTTTGAAAGAGTGTGCCATGATTTCCAAGACTGCAGGTGGTGTTGGTCTTCATATCAAC 1516 Query 110631 GATATTCGCTCAAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTT 110690 ||||||| || | ||| | |||| ||| | || ||| |||||| || | || Sbjct 1515 AATATTCGTTCCACAGGCTCTTATATTGCAGGTACCAACGGTACTTCAAACGGGTTGATT 1456 Query 110691 CCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGT---AAGAGA 110747 || ||| | | ||||||||| |||||||| || ||| | ||||||||| |||||| Sbjct 1455 CCCATGATCCGTGTCTTCAACAACACTGCACGTTACGTGGACCAAGGTGGTAACAAGAGA 1396 Query 110748 AATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAA 110807 || | ||||| | | | || || |||||| |||| || || || || | || Sbjct 1395 CCCGGTGCCTTTGCCCTTTTCTTGGAGCCATGGCATGCAGACATCTTCGACTTTGTCGAT 1336 Query 110808 CTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGG 110867 | | || | ||| || |||||| | ||| | ||||| || ||| | ||| Sbjct 1335 ATCAGAAAGACTCATGGTAAGGAAGAAATTCGTGCAAGAGATTTGTTCCCTGCTCTATGG 1276 Query 110868 ATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGG 110905 ||| | ||| | |||||||| ||||| |||| |||| Sbjct 1275 ATTCCCGATCTTTTCATGAAGCGTGTCGAAGAGGATGG 1238 >seq2673 Length=843 Score = 91.5 bits (100), Expect = 3e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 167616 GCAGCAATAGACATAGTGTCAAAAACATCGATGAAACTTTTCCAGATTTTTATCGAACCA 167675 ||||| | || || ||||| || |||||||| ||||||||||| | || || | Sbjct 801 GCAGCTAGAGGCAGAGTGTTGAAGGTGTCGATGAACGTTTTCCAGATTCTGATATTACAA 742 Query 167676 CGTCGTTTGCATTCATCGTAAAAACCATAGTCTCTTGAGATATCAGCACATTCGTGATTT 167735 |||||||| |||||||| ||||| ||||| |||||| | || ||||||||||| || Sbjct 741 CGTCGTTTACATTCATCATAAAATCCATAAACTCTTGTTACATTGGCACATTCGTGGTTA 682 Query 167736 CCTCTTAA 167743 ||||| || Sbjct 681 CCTCTCAA 674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186752203934585