Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21] 3,985 sequences; 11,595,011 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq2084 132 7e-25 seq1567 86.0 9e-11 >seq2084 Length=1521 Score = 132 bits (146), Expect = 7e-25 Identities = 385/581 (66%), Gaps = 29/581 (5%) Strand=Plus/Plus Query 1455749 GTCCTGTTCCCCATCCGCTACCAGCGGATATGGGAAATGTACCAAAAAGGCCGAGGCCTC 1455808 ||| |||||||||||| ||||| ||| ||| || |||| || ||||||||||| Sbjct 339 GTCTTGTTCCCCATCCAGTACCACGAGATCTGGCAATCGTAC-AAGCGTGCCGAGGCCTC 397 Query 1455809 CTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGACACGGTCCACTGGGTGTCGC---- 1455864 ||| ||||| |||||||| ||||| | | |||| ||||| | || | Sbjct 398 CTTCTGGACTGCCGAGGAAATCGACTTGTCCAAGGACA---TCCAC-GACTGGAACAACA 453 Query 1455865 ---TGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGC 1455921 ||| ||| |||| | |||||| || || ||||| || ||||||| | Sbjct 454 GAATGAACGAAAACGAAAGATTCTTCATCTCCAGAGTGCTTGCCTTCTT-CGCCGCCTCC 512 Query 1455922 GATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAG 1455981 || || ||||| ||| ||| ||| || ||| | |||||||| | || ||| Sbjct 513 GACGGTATCGTCAACGAAAACTTGGTCGAGAACTTCTCCACCGAGGTCCAGATCCCGGAG 572 Query 1455982 GCACGTTTGTTT-TACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTC 1456040 || | |||| ||||||||||||||||| ||||| ||||||||||| ||||||||||| Sbjct 573 GC-CAAGAGTTTCTACGGGTTCCAGATCGCAATCGAGAACATCCACTCCGAAACCTACTC 631 Query 1456041 GCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTTCGCGCCAT 1456100 | |||||||||||||| |||||||||| || | || | | || |||||| Sbjct 632 CTTGTTGATCGACACCTACATCAAGGACCCCAAGGAAAGCGAGTTCTTGTTCAACGCCAT 691 Query 1456101 CGACACGGTGCC----GTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAACA 1456156 |||||| | || || | ||| |||||||| ||||| | | ||||| | Sbjct 692 CGACACCATCCCAGAAATCTGCGAG----AAGGCCGAATGGGCCCTTAGATGGAT---CC 744 Query 1456157 AGGAGGGC-CTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCC-GCGTCGAGGGCATCT 1456214 |||| | | | | || | || | || |||| || ||| | |||| || ||| Sbjct 745 AGGACGCCGATGCCCTGTTCGGTGAAAGACTGGTCGCGTTCGCCTCCATCGAAGGTGTCT 804 Query 1456215 TTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTC 1456274 | || || || ||| | ||||||| ||| | ||||| | || | ||||||||| Sbjct 805 TCTTTTCCGGGTCCTTCGCCTCCATCTTCTGGTTGAAGAAAAGAGGTATGATGCCCGGT- 863 Query 1456275 TTCTGCTTTAGCAACGAATTTATCAGTCGCGACGAAGTTTT 1456315 || ||| ||||||| | ||| | | ||||||| ||| Sbjct 864 TTGACCTTCTCCAACGAACTGATCTGCAGAGACGAAGGTTT 904 >seq1567 Length=2367 Score = 86.0 bits (94), Expect = 9e-11 Identities = 173/257 (67%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 259925 CCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGAC 259984 ||||| || ||||||||||| ||||| | || || | || || || || ||| | | | Sbjct 1668 CCCACACTATTTAATGCCGGTACGCCACATCCTCAAATGTCTTCTTGTTTCCTGATTGCC 1609 Query 259985 ATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCC 260044 ||||||| ||| || || || || || || ||||| | || |||| || | || ||| Sbjct 1608 ATGAAGGACGACTCCATTGAAGGTATTTACGACACTTTGAAAGAGTGTGCCATGATTTCC 1549 Query 260045 AAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTG 260104 ||| | || || || | ||| || |||| | || || | ||| | || | Sbjct 1548 AAGACTGCAGGTGGTGTTGGTCTTCATATCAACAATATTCGTTCCACAGGCTCTTATATT 1489 Query 260105 GCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACG 260164 || || |||||||| || ||||| | | |||||| | || || || ||| |||| Sbjct 1488 GCAGGTACCAACGGTACTTCAAACGGGTTGATTCCCATGATCCGTGTCTTCAACAACACT 1429 Query 260165 GCGCGCTACGTCGACCA 260181 || || ||||| ||||| Sbjct 1428 GCACGTTACGTGGACCA 1412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177426839425570