Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21] 3,985 sequences; 11,595,011 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq1567 389 5e-103 seq3120 165 1e-35 seq2589 105 9e-18 >seq1567 Length=2367 Score = 389 bits (430), Expect = 5e-103 Identities = 1227/1877 (65%), Gaps = 52/1877 (3%) Strand=Plus/Plus Query 68370 CAATG-TAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGTTT 68428 ||||| |||| ||||||| || || |||| || ||| | | ||||||||||| || | Sbjct 6 CAATGGTAAATTGAATGGCTGCAGAAGCGGCTTGTGTTCTCAAGTAGTACATACCCGTCT 65 Query 68429 TCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGG 68488 ||| ||| |||| |||||||||||||||||||| | ||| | | ||| | Sbjct 66 TCAAACCCTTCTTCCAACCGTAGAAATGCATACTTGTAATTTTACC----CATTGATGGT 121 Query 68489 C--TATATGAATA--TTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCC 68544 | || ||| | |||| || || |||||| ||| || | ||| || ||| Sbjct 122 GATTGTAGGAACAAATTCAAGGAGTGGGATTGATCAATGTAAATGGAACGATCAGCAGCC 181 Query 68545 ATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCA 68604 || || |||||| ||||||||| |||||||| | ||| ||| | | | ||| | ||| Sbjct 182 ATGTTGATAATAGTCTTTTGAGAGATTTCCCAGACAGTTTTATATAGATCTTTCAAATCT 241 Query 68605 TCTGGAAGGCTCGT---ATTTTGAATGGATCCACCATCGGATATAATTATATTCTTG-AT 68660 | |||| | | | || || |||||| ||| | | || | ||||| || || Sbjct 242 TGAGGAACGTTTGGTAAATCTTTAATGGAGCCATTTTGAGTAATCAA-ATATTGTTTCAT 300 Query 68661 CTCATCATTCCACAATTTTCTCTCCGT-TAAAACTCTAAGGAGATGCGGATTAACTATTT 68719 ||||| ||| ||| | || |||| | | || | | ||||| || | || Sbjct 301 ACTATCATCCCA-AATGCCCAGATCGACTAAATCACGTAGTAAGTATGGATTGACGACTT 359 Query 68720 GAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATT 68779 | ||||| |||||||| || | ||||| ||| || || || |||||| | | | | Sbjct 360 GGAATTCACCAGATAAGACACGACGAGAGTACATGTTTGAAGTGACTGGTTCGAAACACT 419 Query 68780 CATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTAT 68839 |||| | || |||||||| | ||||| || |||||||| || |||| |||| | Sbjct 420 CATTGTACCCAAGAATTTGGGATGTTGAAGCGGTTGGCATTGGGGCCATGGTTAAAGAGT 479 Query 68840 TTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGATG 68899 |||| | |||||| | | || | | || | | | ||||||||| | || ||| Sbjct 480 TTCTTAACCCATGTTTCACAATGTCCTTCTTCAAAGTGTCCCAATCCCACATGCCAAATG 539 Query 68900 GTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTATATG 68959 | | ||||||| | ||| | |||| ||| || ||| ||| || || | | | | Sbjct 540 GCTTAGCATTCCACATGTCGAACTGTAAAATACCCTTAGAGGCAGGAGAGCCTTCAAAAG 599 Query 68960 TTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAAA 69019 | ||| ||||||| || ||||| |||||| || || | | | | | |||| Sbjct 600 TGGAATATTTACCTTCCTTTTGAGCTAACTCACAAGAAGCTTCAAGGGTAGCATGGTAAA 659 Query 69020 TTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAATGTA 69079 | ||||||||||| | ||||| || ||| |||| | || || ||||| || | | Sbjct 660 TAGTTTCGAAAATTTGTTTATTAAGTATTTGAGCTTTTTCACATTCAAATGGTAAACGCA 719 Query 69080 AAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTAT 69139 | ||| | | ||| ||||| || |||||||| | | |||||||||||| || | | Sbjct 720 GCATCATATAAGTATCGGCCAAACCTTGAACCCCCAGGGCAATAGGTCTATGTTTCATGT 779 Query 69140 TTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGATTTC 69199 | || || ||| ||||| | |||||||| ||| || || | | |||| | | || Sbjct 780 TAGAGTTTCTAGCCTCTGGCACTGGATAATAGTTACGGTCGATGACTCTATTCA-AGTTA 838 Query 69200 GGACTACT-ACTTTAACCACGTCCTTTAG--TTTGAGAAAATCAAAT----CGT----CC 69248 || | | |||||| | | ||| | || |||| |||| | | ||| || Sbjct 839 TGAGTGATGACTTTAGCAATGTCATGTAAACTTTG-GAAATTGTAGGTCGCCGTTTTACC 897 Query 69249 ATCTATAACA-----AACATATTC----AGTGCTACAGATGCTAGATTACAAACTGCTAC 69299 |||| | ||| || | || || | || |||| ||||||||| || Sbjct 898 ATCTTCCGAAGTCTCAACGAATGCTGGTAGAGCAATGGAAGCTAAATTACAAACAGCAGT 957 Query 69300 CTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCC 69359 |||| | | ||| | | || || ||| | || ||||||| || || Sbjct 958 TTCATCTGGGGAAGAATACTCGACGATTTCGCAACACAAGTTTGACGATTTGATGGTACC 1017 Query 69360 CAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACC 69419 ||| || || || || ||||| |||||||||| ||||| |||| || || || ||||| Sbjct 1018 CAGGTTCTGTTGGTTGGTCTTTCTGTTACAGGCATCCTTATAAACCATGAAGGGTGTACC 1077 Query 69420 AGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTT 69479 ||||| | || | || | || | | ||| || ||| || || ||| || Sbjct 1078 GGTTTCTGTTTGTGCTTGCAAGATGGCGTACCATACCTTTTGAGCCTTGAT---GGTTTT 1134 Query 69480 GTAACG--CTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACA 69537 ||| ||||||||| | || | ||||||||| ||||||||| || |||||||| Sbjct 1135 ACCACGACCTTCTCTTT--CGTAACGGGTATATAGCTCTTCGAATTCTTCACCCCAAACG 1192 Query 69538 TCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACT 69597 || ||||| || || || |||| | | || | ||| | |||| || | || Sbjct 1193 TCGTCCAAACCTGGGGCAGCACTTGGTGAGAATAAGGTCCAGGCCCCATCCTCTTCGACA 1252 Query 69598 CGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCT 69657 || ||||| || |||||||||||||| ||||| || | |||||| | | | ||||| Sbjct 1253 CGCTTCATGAAAAGATCGGGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCT 1312 Query 69658 TCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCT 69717 || || || | | ||| | | ||||| ||| || | || || | ||||||||| || Sbjct 1313 TCCTTACCATGAGTCTTTCTGATATCGACAAAGTCGAAGATGTCTGCATGCCATGGCTCC 1372 Query 69718 AGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTG 69777 | | | || | | | || |||| || || || || || || | ||| | |||||| Sbjct 1373 AAGAAAAGGGCAAAGGCACCGGGTCTCTTGTTACCACCTTGGTCCACGTAACGTGCAGTG 1432 Query 69778 TTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATA 69837 || || |||| | | ||| ||||| | || || || |||| || || || | |||| Sbjct 1433 TTGTTGAAGACACGGATCATGGGAATCAACCCGTTTGAAGTACCGTTGGTACCTGCAATA 1492 Query 69838 TAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAG 69897 ||| ||| | | |||||||| | ||| ||||| | || ||||| | || || Sbjct 1493 TAAGAGCCTGTGGAACGAATATTGTTGATATGAAGACCAACACCACCTGCAGTCTTGGAA 1552 Query 69898 ATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTA 69957 || | ||||| |||||| ||||| || ||||| || ||| || || ||||| | Sbjct 1553 ATCATGGCACACTCTTTCAAAGTGTCGTAAATACCTTCAATGGAGTCGTCCTTCATGGCA 1612 Query 69958 AGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGAT 70017 | || ||||| |||||||||| ||||| || || |||||||||| ||| || || Sbjct 1613 ATCAGGAAACAAGAAGACATTTGAGGATGTGGCGTACCGGCATTAAATAGTGTGGGGGAA 1672 Query 70018 GCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGT-TTCAATAGCTGATTCTATATC 70076 ||||| ||||| || | || | || ||||| || |||| | | || || ||||| Sbjct 1673 GCGTGGGTGAAGTATCTCAACGACATCAAGTTGTAAGTCTTCAGCA-CGGACTCGATATC 1731 Query 70077 CCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTT 70136 | ||||| |||| || |||||||| | || ||| || || ||||| || || Sbjct 1732 GCTGCCGTGAATACCTAGGGCCACACGCATGACCAAATGTTGGGGACGTTCGGCCACTTC 1791 Query 70137 ATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTA--T 70194 | | || | | | |||||| || ||||||||| ||||||||||||||| |||| | Sbjct 1792 ACCGTCTAGTCTTAGCAGGTA-GAACGTTCCAGAGTCTTAAACCCAAAATAGGTGTACTT 1850 Query 70195 GAAAAGTCTCTTTCGTA 70211 |||| ||||| ||||| Sbjct 1851 GAAA--TCTCTGTCGTA 1865 >seq3120 Length=488 Score = 165 bits (182), Expect = 1e-35 Identities = 321/469 (68%), Gaps = 4/469 (1%) Strand=Plus/Plus Query 69772 GCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCA 69831 |||||||| || |||| | | ||| ||||| | || ||||| | || || || ||| Sbjct 1 GCAGTGTTGTTGAAGACACGGATCATAGGAATTAACCCGTTAGAAGTCCCGTTCGTACCA 60 Query 69832 GAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATT 69891 | ||| ||| || |||| ||||| || |||| |||||| || || || || || Sbjct 61 GCAATGTAAGAGCCGGTTGCACGAATGTTGTGAATATGTAGACCAATACCACCAGCAGTT 120 Query 69892 TTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATC 69951 || || || | |||||| ||||| ||||| || ||||| || ||| |||||| || Sbjct 121 TTGGAAATCAAAGCACATTCCTTCAAAGTGTCGTAGATACCTTCAATGGAATCATCCTTC 180 Query 69952 ATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTA 70011 || || || |||||| ||||||||| | | | || || || || ||||| || Sbjct 181 ATTGCAACTAGGAAACAGGAGGACATTTGAGGCTTTGGTGTACCAGCGTTGAATAAAGTT 240 Query 70012 GGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCT 70071 ||||| |||||||| || ||||| || | || || || ||||| | ||| | || Sbjct 241 GGAGAGGCGTGAGTAAAGTATTTTAGGGACATCAAGTTATAGGTTTCTAGAGCGGCCTCA 300 Query 70072 ATATCC-CACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTAC 70130 || | ||| | ||||| |||| ||||| | ||| | | || || || ||||| | Sbjct 301 ATGTTATCACCG-TGAATACCTAAGGCGACTCTCATGATTAAGTGTTGTGGACGTTCAGC 359 Query 70131 CGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTT 70190 || | || | | |||| | ||| || ||| | ||||||||| || || || | Sbjct 360 AACTTGACCGTTGACTCTCAATAAGTACGAACGTTCTAAAGTTTTAAAACCGAAGTAACT 419 Query 70191 GTA-TGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTT 70238 ||| |||||| ||||| || || | |||| | || |||||||||||||| Sbjct 420 GTACTGAAAA-TCTCTGTCATAGACAATAGCTGAGTTTAGTTTATCCTT 467 >seq2589 Length=927 Score = 105 bits (116), Expect = 9e-18 Identities = 304/468 (65%), Gaps = 0/468 (0%) Strand=Plus/Minus Query 68707 GGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATAT 68766 ||||| || | ||||||||| ||||||| || | ||||| ||| || || ||| | Sbjct 918 GGATTGACGACTTGAAATTCACCAGATAGAACACGACGAGAGTACATGTTGGAAGTAACT 859 Query 68767 GGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCC 68826 ||||| | | | || || | || | ||| || | ||| |||||||| |||||||||||| Sbjct 858 GGTTCGAAACACTCGTTGTAACCTAAAATCTGGGAAGTGGATGCAGTAGGCATAGGTGCC 799 Query 68827 ACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCC 68886 | ||| ||||||| |||||| | ||||| | || | | | | | ||||||| Sbjct 798 ATGGTCAAAGAGTTTCTAACACCATGCTTCATGATGTCATTTCTCAAAGTATCCCAATCC 739 Query 68887 CAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATAT 68946 || | | | | ||| | | ||| | ||| |||| || || || | | || Sbjct 738 CACATACCGTAAGGTTTTTCGTCCCACATGTCGAATTGAAGTATACCTTGAGAAGCTGGA 679 Query 68947 GATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAAT 69006 || || | | ||||| || || || || || |||||| |||||| || || | Sbjct 678 GAGCCTTGGAAGGTTTCGTATGGGCCATCTCTTTGAGCTAGCTCACAAGAGGCTTCCATG 619 Query 69007 GCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCG 69066 | | | | || || ||||| || || | |||| || |||||||| ||| Sbjct 618 GAAGCATGGTACATGGTTTCAAAGATTTGTATATTTAGTAAGCGTGCTTCTTCGGAGTCG 559 Query 69067 AATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGT 69126 ||||| || | || | || || | || ||||| || || || || | | | || || Sbjct 558 AATGGTAAACGCAACAACATGAAAGTGTCAGCCAAACCTTGGACACCCAAAGCAATCGGC 499 Query 69127 CTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTA 69174 || |||||| |||| || ||| ||||| | ||||||||| ||| Sbjct 498 CTGTGTCTCATATTAGATCTTCTTGCTTCCTCGACAGGATAATAGTTA 451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686874583355400