Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21]
3,985 sequences; 11,595,011 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq2589 167 3e-36
seq3120 82.4 1e-10
>seq2589
Length=927
Score = 167 bits (184), Expect = 3e-36
Identities = 472/713 (66%), Gaps = 24/713 (3%)
Strand=Plus/Minus
Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766
||| ||||| | || |||||| || || || || | ||| || || || | |||||
Sbjct 877 GTACATGTTGGAAGTAACTGGTTCGAAACACTCGTTGTAACCTAAAATCTGGGAAGTGGA 818
Query 110767 GGCTGTTGGCATTGGTGCCATCA--AAAGACTGTTACGAAGACCCTTCTCCTTGATG-CG 110823
|| || ||||| |||||||| ||||| ||| | || ||| | || | ||||| |
Sbjct 817 TGCAGTAGGCATAGGTGCCATGGTCAAAGA--GTTTCTAACACCATGCTTCATGATGTCA 760
Query 110824 TTCCTTGAGAACATCCCAGTCGTAGTTGAGCTT--GGTTTCACCTTCCCACATGTCAAAC 110881
|| || | | |||||| || | | | | | ||||| | | |||||||||| ||
Sbjct 759 TTTCTCAA-AGTATCCCAATCCCACAT-ACCGTAAGGTTTTTCGT-CCCACATGTCGAAT 703
Query 110882 TGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCA 110941
||||| | ||||| || || ||||| || | |||||||| || | || | || |
Sbjct 702 TGAAGTATACCTTGAGAAGCTGGAGAGCCTTGGAAGGTTTCGTATGGGCCATCTCTTTGA 643
Query 110942 GCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTC 111001
|| | ||||| || |||| ||| || || ||||||||||||||||| | |||
Sbjct 642 GCTAGCTCACAAGAGGCTTCCATGGAAGCATGGTACATGGTTTCAAAGATTTGTATATTT 583
Query 111002 A-TCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAG 111060
| | | | ||||| || || || |||| | || |||| || || || || |
Sbjct 582 AGTAAGCGT-GCTTCTTCGGAGTCGAATGGTAAACGCAACAACATGAAAGTGTCAGCCAA 524
Query 111061 ACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAAC 111120
|||||| ||||||||| |||| || ||||||| ||||||||| ||| || ||| ||
Sbjct 523 ACCTTGGACACCCAAAGCAATCGGCCTGTGTCTCATATTAGATCTTCTTGCTTCCTCGAC 464
Query 111121 GGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTC 111180
|||||| | || | |||||| || ||||| || || | || || | |||||
Sbjct 463 AGGATAATAGTTACGGTCAATAACGTTGTTTAAGTTACGAGTGATAACTTTAGAAATTTC 404
Query 111181 ATGAAGTTTTTCATAATCAAAAGTGCGAGT------CTCTTCA----TTGACATACTT-- 111228
||| || |||| | | | | || ||| |||||| || ||| |
Sbjct 403 ATGTAGCTTTTTGAAGTTATATGTAGAAGTTTTGCCGTCTTCAGATGTTTCAATAAATGC 344
Query 111229 TGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAA 111288
||| | || | || ||||| || |||||||| |||||||| | | | ||| || |
Sbjct 343 TGGCAAAGCAACAGAAGCCAAGTTACAAACAGCAGTCTCATCTGGAGCGGAGTATTCAAC 284
Query 111289 AATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTT 111348
|||||| || ||||| || ||| || ||||| ||||||||||| ||| |
Sbjct 283 AATTTCACAGCACAAGTTAGACGACTTGATAACACCCAAGTTCTTTTGGTTGGATTTCCT 224
Query 111349 GTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATT 111401
||| || ||||||||||| | | |||| || || || ||||| |||| ||
Sbjct 223 GTTACAAGCATCCTTGTAAACAACAAAGGGTGTACCAGTTTCCGTTTGTGCTT 171
>seq3120
Length=488
Score = 82.4 bits (90), Expect = 1e-10
Identities = 169/249 (68%), Gaps = 2/249 (1%)
Strand=Plus/Plus
Query 111836 CCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCG 111895
|||||||| ||||| || || || ||||| ||| | | ||| | ||||||||
Sbjct 103 CCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAAGTGTCGTAGATACCT 162
Query 111896 TTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTA 111955
| || || || ||||| | || | ||||| || |||||| || || ||||||||
Sbjct 163 TCAATGGAATCATCCTTCATTGCAACTAGGAAACAGGAGGACATTTGAGGCTTTGGTGTA 222
Query 111956 CCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT-GGGACATCTTGTCGTA 112014
||||| ||||| | ||||| | |||||| | || || || |||||||| || ||
Sbjct 223 CCAGCGTTGAATAAAGTTGGAGAGGCGTGAGT-AAAGTATTTTAGGGACATCAAGTTATA 281
Query 112015 TGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACAT 112074
|| || | | | ||||||| || ||||| || || | ||||| | ||||| |
Sbjct 282 GGTTTCTAGAGCGGCCTCAATGTTATCACCGTGAATACCTAAGGCGACTCTCATGATTAA 341
Query 112075 GTACTGTGG 112083
|| |||||
Sbjct 342 GTGTTGTGG 350
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628000716156000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |