Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21]
3,985 sequences; 11,595,011 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq1567 127 3e-24
seq2589 118 1e-21
seq18 114 2e-20
seq3120 105 8e-18
>seq1567
Length=2367
Score = 127 bits (140), Expect = 3e-24
Identities = 870/1384 (63%), Gaps = 38/1384 (3%)
Strand=Plus/Plus
Query 118199 TGGCTCAAAGCACTCATTGTTACCCAAGA-TTTGGGCTGTGGAGGCTGTGGGCATGGGTG 118257
||| || || |||||||||| |||||||| |||||| ||| || || || ||||| || |
Sbjct 406 TGGTTCGAAACACTCATTGT-ACCCAAGAATTTGGGATGTTGAAGCGGTTGGCATTGGGG 464
Query 118258 CCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGT 118317
||||| | ||| | | || | || | |||| | ||| | || |||||| |
Sbjct 465 CCATGGTTAAAGAGTTTCTTAACCCATGTTTCACAATGTCCTTCTTCAAAGTGTCCCAAT 524
Query 118318 CGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTG 118377
| | || || || | | |||||| || ||||| | ||||| | || || |
Sbjct 525 CCCACATGCCAAATGGCTTAGCATTCCACATGTCGAACTGTAAAATACCCTTAGAGGCAG 584
Query 118378 GCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGA 118437
| || || ||||| || |||| || || | || || || | || || |
Sbjct 585 GAGAGCCTTCAAAAGTGGAATATTTACCTTCCTTTTGAGCTAACTCACAAGAAGCTTCAA 644
Query 118438 GGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAAT 118497
||| || || || || ||||| ||||| | ||| | | | || | || | |
Sbjct 645 GGGTAGCATGGTAAATAGTTTCGAAAATTTGTTTATTAAGTATTTGAGCTTTTTCACATT 704
Query 118498 CAAACGCGAGTCG--GCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAAT 118555
|||| | | || ||| | |||| || || || | |||||| || || ||| ||||
Sbjct 705 CAAATGGTAAACGCAGCATCATATAAGTA--TCGGCCAAACCTTGAACCCCCAGGGCAAT 762
Query 118556 TGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTC-CACGGGATAAAAATTCCTATCGA 118614
|| | |||| |||| ||||| || | ||| ||| ||| |||||| | || | ||||
Sbjct 763 AGGTCTATGTTTCATGTTAGAGTTTCTAGCC-TCTGGCACTGGATAATAGTTACGGTCGA 821
Query 118615 TAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAA 118674
| || ||||| | || | |||| || || | || ||||| | ||| | |||
Sbjct 822 TGACTCTATTCAAGTTATGAGTGATGACTTTAGCAATGTCATGTAAACTTTGGAAATTGT 881
Query 118675 AACTGCGAGTCT------CTTC---ATTGACATACTTA----GGAAGGGCGATTGACGCC 118721
| | || | |||| | | || || | || || || || || ||
Sbjct 882 AGGTCGCCGTTTTACCATCTTCCGAAGTCTCA-ACGAATGCTGGTAGAGCAATGGAAGCT 940
Query 118722 AGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTT 118781
| |||||| |||| || ||||| || ||||| | ||||| |||||||||
Sbjct 941 AAATTACAAACAGCAGTTTCATCTGGGGAAGAATACTCGACGATTTCGCAACACAAGTTT 1000
Query 118782 GAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAA 118841
|| || ||||| |||| ||||| ||| || | |||| ||||||| |||||||| |||
Sbjct 1001 GACGATTTGATGGTACCCAGGTTCTGTTGGTTGGTCTTTCTGTTACAGGCATCCTTATAA 1060
Query 118842 AGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTG-AGAATAGCCTTCCAGACATCGGC 118900
| |||| | || || || || || ||||| | |||| | || || | ||| || |
Sbjct 1061 ACCATGAAGGGTGTACCGGTTTCTGTTTGTG-CTTGCAAGATGGCGTACCATACCTTTTG 1119
Query 118901 AGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAA 118960
||| | ||| || | || || ||| ||||| || || || |||| ||
Sbjct 1120 AGC---CTTGATGGTTTTACCACGACCTTCTCTTTCGTAACGGGTATATAGCTCTTCGAA 1176
Query 118961 CTCTTCACCC---ACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCA 119017
||||||||| ||| | || | ||||| || | ||| |||| | | |||
Sbjct 1177 TTCTTCACCCCAAACGTCGTC---CAAACCTGGGGCAGCACTTGGTGAGAATAAGGTCCA 1233
Query 119018 TTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAG 119077
||| |||| || || ||||||||||| || || || ||||| || || | ||| |
Sbjct 1234 GGCCCCATCCTCTTCGACACGCTTCATGAAAAGATCGGGAATCCATAGAGCAGGGAACAA 1293
Query 119078 ATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGAT 119137
||| | ||| |||||| | || ||| | | | || | |||||| | |||
Sbjct 1294 ATCTCTTGCACGAATTTCTTCCTTACCATGAGTCTTTCTGATATCGACAAAGTCGAAGAT 1353
Query 119138 ATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACCCCTTACGACG--ACCAGCCTG 119194
|| || ||||| || |||| | | | || | | ||| | | |||| | ||
Sbjct 1354 GTCTGCATGCCATGGCTCCAAGAAAAGGGCAAAGGCACCGGGTCTCTTGTTACCACCTTG 1413
Query 119195 GTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTG 119254
|| || || | |||||| ||| || ||||| | ||| ||||| | || | ||
Sbjct 1414 GTCCACGTAACGTGCAGTGTTGTTGAAGACACGGATCATGGGAATCAACCCGTTTGAAGT 1473
Query 119255 GCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAAT 119314
|| || || || |||| ||| ||| | | || || ||| || | |||||
Sbjct 1474 ACCGTTGGTACCTGCAATATAAGAGCCTGTGGAACGAATATTGTTGATATGAAGACCAAC 1533
Query 119315 ACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGAT 119374
||| ||||| ||| || || || ||||| | | | || |||| || || || ||
Sbjct 1534 ACCACCTGCAGTCTTGGAAATCATGGCACACTCTTTCAAAGTGTCGTAAATACCTTCAAT 1593
Query 119375 CGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGC 119434
||||| |||| | || || ||||| || ||||||||||| || ||||| ||
Sbjct 1594 GGAGTCGTCCTTCATGGCAATCAGGAAACAAGAAGACATTTGAGGATGTGGCGTACCGGC 1653
Query 119435 GTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTGTCGTAGGTCT 119493
|| || || || || | |||||| |||| || || |||||| || ||| ||||
Sbjct 1654 ATTAAATAGTGTGGGGGAAGCGTGGGTGAA-GTATCTCAACGACATCAAGTTGTAAGTCT 1712
Query 119494 CCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATT 119553
|| |||| || || ||||||||||| | | || ||||| | || | ||
Sbjct 1713 TCAGCACGGACTCGATATCGCTGCCGTGAATACCTAGGGCCACACGCATGACCAAATGTT 1772
Query 119554 GGGG 119557
||||
Sbjct 1773 GGGG 1776
>seq2589
Length=927
Score = 118 bits (130), Expect = 1e-21
Identities = 353/542 (65%), Gaps = 16/542 (3%)
Strand=Plus/Minus
Query 118343 CCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGG 118402
|||||| || || || || |||||||| || ||||| || || | || || || |||||
Sbjct 715 CCACATGTCGAATTGAAGTATACCTTGAGAAGCTGGAGAGCCTTGGAAGGTTTCGTATGG 656
Query 118403 GCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAA 118462
||| || | || | || | || || | || || || ||||| ||||||||
Sbjct 655 GCCATCTCTTTGAGCTAGCTCACAAGAGGCTTCCATGGAAGCATGGTACATGGTTTCAAA 596
Query 118463 AATGCGAGCATTCATT--GCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATA 118520
|| | ||| | | || | || || ||||| || || | | || |||| ||
Sbjct 595 GATTTGTATATTTAGTAAGCGT--GCTTCTTCGGAGTCGAATGGTAAACGCAACAACATG 538
Query 118521 AATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTC 118580
|| || || | |||||||||||| | |||| || | |||||||||||||| |
Sbjct 537 AAAGTGTCAGCCAAACCTTGGACACCCAAAGCAATCGGCCTGTGTCTCATATTAGATCTT 478
Query 118581 CGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACA 118640
| || ||| || |||||| | || | || ||||| | |||| || |||| |
Sbjct 477 CTTGCTTCCTCGACAGGATAATAGTTACGGTCAATAACGTTGTTTAAGTTACGAGTGATA 418
Query 118641 ACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCT------CTTCA--- 118691
|| || | |||||||| ||||||| | | | | | | ||| | |||||
Sbjct 417 ACTTTAGAAATTTCATGTAGCTTTTTGAAGTTATATGTAGAAGTTTTGCCGTCTTCAGAT 358
Query 118692 -TTGACATACTTA--GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTA 118748
|| ||| | || | || | || |||| ||||| |||| |||||||| |
Sbjct 357 GTTTCAATAAATGCTGGCAAAGCAACAGAAGCCAAGTTACAAACAGCAGTCTCATCTGGA 298
Query 118749 TCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTT 118808
| | ||| || | |||||| ||||||||| || ||| || ||||||||||||
Sbjct 297 GCGGAGTATTCAACAATTTCACAGCACAAGTTAGACGACTTGATAACACCCAAGTTCTTT 238
Query 118809 TGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTT 118868
|| || || || ||||||| ||||||||||||| | | || || || || ||||||
Sbjct 237 TGGTTGGATTTCCTGTTACAAGCATCCTTGTAAACAACAAAGGGTGTACCAGTTTCCGTT 178
Query 118869 TG 118870
||
Sbjct 177 TG 176
>seq18
Length=17773
Score = 114 bits (126), Expect = 2e-20
Identities = 137/186 (74%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 167937 CCAGTAGGTGTCTACGGTCGCGTGGCGCCAAGATCTGGACTCGCTGTGAAGAGTGGTATC 167996
||||| ||| ||||||| | | ||||||||||| || || || ||||| | |||||
Sbjct 16930 CCAGTCGGTACCTACGGTAGAATCGCGCCAAGATCAGGCCTAGCAGTGAAAAACGGTATT 16871
Query 167997 CAAGTTGGTGCGGGTGTTGTTGATCCAGACTATACGGGTGAAGTCAAAGTCGTTCTCTTC 168056
||| ||||| |||||||| || |||||| || ||||||||||| || | | ||
Sbjct 16870 CAAACGGGTGCTGGTGTTGTCGACAGAGACTACACCGGTGAAGTCAAGGTTATCTTATTT 16811
Query 168057 AATCACGGGCACACAGATTTCCAAATCAAAAAGGGGGATCGCATCGCGCAACTCATCTTA 168116
||||| ||| | |||||| |||||||| || ||||| ||||| ||| | |||||
Sbjct 16810 AATCATTCGCAGAAGGATTTCGCGATCAAAAAAGGTGATCGTATCGCCCAATTGATCTTG 16751
Query 168117 GAGAGG 168122
|| |||
Sbjct 16750 GAAAGG 16745
>seq3120
Length=488
Score = 105 bits (116), Expect = 8e-18
Identities = 164/232 (71%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 119297 GTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACT 119356
||| || || | ||||||||| || || || || || || || ||| | | | |
Sbjct 90 GTGAATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAAGT 149
Query 119357 GCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTG 119416
| ||||||| || || || || ||| |||| |||| | ||||| ||| ||||||||
Sbjct 150 GTCGTAGATACCTTCAATGGAATCATCCTTCATTGCAACTAGGAAACAGGAGGACATTTG 209
Query 119417 AGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTT-GGG 119475
|||| | ||||||||||||||||| | |||||| | |||| || || || || |||
Sbjct 210 AGGCTTTGGTGTACCAGCGTTGAATAAAGTTGGAGAGGCGT-GAGTAAAGTATTTTAGGG 268
Query 119476 ACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACC 119527
||||| || ||||| || | |||| ||||| || |||||||||||
Sbjct 269 ACATCAAGTTATAGGTTTCTAGAGCGGCCTCAATGTTATCACCGTGAATACC 320
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618404394196600
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