Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21]
3,985 sequences; 11,595,011 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq2589 129 7e-25
seq3120 91.5 2e-13
>seq2589
Length=927
Score = 129 bits (142), Expect = 7e-25
Identities = 447/688 (65%), Gaps = 22/688 (3%)
Strand=Plus/Plus
Query 104909 CAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAAT 104968
||||| || ||||||||||| | | ||||||| || || |||||| || ||
Sbjct 176 CAAACGGAAACTGGTACACCCTTTGTTGTTTACAAGGATGCTTGTAACAGGAAATCCAAC 235
Query 104969 CAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACA 105028
|||||||| |||||||| |||||| || || | || ||||| | |||| |
Sbjct 236 CAAAAGAACTTGGGTGTTATCAAGTCGTCTAACTTGTGCTGTGAAATTGTTGAATACTCC 295
Query 105029 GACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCC--CAAGTATGTGG 105086
| ||||||||| ||||| |||||| | || || | ||| | || || ||| ||
Sbjct 296 GCTCCAGATGAGACTGCTGTTTGTAACTTGGCTTCTGTTGCTTTGCCAGCATTTAT-TGA 354
Query 105087 ATCC-----AGA-GACAAAG-----ACATTTGATTATGAAAAACTCCACGAAGTTACGAA 105135
| | ||| | |||| |||| | | | |||| || || ||| || | ||
Sbjct 355 AACATCTGAAGACGGCAAAACTTCTACATATAACTTCAAAAAGCTACATGAAATTTCTAA 414
Query 105136 AACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGC 105195
| | |||| ||| |||||| |||||||| | || | ||| || || ||| ||
Sbjct 415 AGTTATCACTCGTAACTTAAACAACGTTATTGACCGTAACTATTATCCTGTCGAGGAAGC 474
Query 105196 TCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGT 105255
| | |||||||||||||||| | || |||| | | ||||| || ||| | || ||
Sbjct 475 AAGAAGATCTAATATGAGACACAGGCCGATTGCTTTGGGTGTCCAAGGTTTGGCTGACAC 534
Query 105256 ATTCATTCTTTGTCGCC---ACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCG 105312
||||| |||| || || |||| || ||||| ||||| | | ||| |
Sbjct 535 TTTCATG--TTGTTGCGTTTAC-CATTCGACTCCGAAGAAGCACGCTTACTAAATATACA 591
Query 105313 CATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGA 105372
|| ||||| |||||||| || || | | || || || ||| | || | ||
Sbjct 592 AATCTTTGAAACCATGTACCATGCTTCCATGGAAGCCTCTTGTGAGCTAGCTCAAAGAGA 651
Query 105373 TGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATAT 105432
||| ||||| |||||||| | || ||||||||||| ||||| | |||||||| || ||
Sbjct 652 TGGCCCATACGAAACCTTCCAAGGCTCTCCAGCTTCTCAAGGTATACTTCAATTCGACAT 711
Query 105433 GTGGGAAGGTGAGACCAAGCTTCACTACGACTGGGAAGCTCTCAAGGAACG-CATCAAGG 105491
|||||| | | | | | | || ||||| || | || || | ||||| |
Sbjct 712 GTGGGACGAAAAACCTTACGGTATGTGGGATTGGGATACT-TTGAGAAATGACATCATGA 770
Query 105492 AGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAA 105551
|| | ||| || | ||| | | |||||| || ||||| || || ||||| | || |
Sbjct 771 AGCATGGTGTTAGAAACTCTTTGACCATGGCACCTATGCCTACTGCATCCACTTCCCAGA 830
Query 105552 TCTTGGGTAATAATGAATGCTTTGAACC 105579
| || ||| | || || || || |||||
Sbjct 831 TTTTAGGTTACAACGAGTGTTTCGAACC 858
>seq3120
Length=488
Score = 91.5 bits (100), Expect = 2e-13
Identities = 171/249 (69%), Gaps = 2/249 (1%)
Strand=Plus/Minus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281
||||| || | ||||| | || ||| | |||||||| || || ||||||| | |
Sbjct 350 CCACAACACTTAATCATGAGAGTCGCCTTAGGTATTCACGGTGATAACATTGAGGCCGCT 291
Query 104282 TTGGAGACATACGACAAGATGTCCC-AAGGTATGTTCATTCACGCAACACCAACCCTCTT 104340
| || || || || |||||||| || || || | |||||| | ||||| | ||
Sbjct 290 CTAGAAACCTATAACTTGATGTCCCTAAAATACTTT-ACTCACGCCTCTCCAACTTTATT 232
Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400
||| ||||||||||||| || ||||||||| || ||||| | || | ||||| ||
Sbjct 231 CAACGCTGGTACACCAAAGCCTCAAATGTCCTCCTGTTTCCTAGTTGCAATGAAGGATGA 172
Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460
|| || | |||||||| | ||| | | ||| ||||| || || || |||||
Sbjct 171 TTCCATTGAAGGTATCTACGACACTTTGAAGGAATGTGCTTTGATTTCCAAAACTGCTGG 112
Query 104461 GGGTATTGG 104469
||||||||
Sbjct 111 TGGTATTGG 103
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583231746321400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |