Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21] 3,985 sequences; 11,595,011 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq3120 82.4 8e-11 >seq3120 Length=488 Score = 82.4 bits (90), Expect = 8e-11 Identities = 144/209 (69%), Gaps = 8/209 (4%) Strand=Plus/Minus Query 19116 TCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGC----GAGACA 19171 ||||| ||||||| | || || || || || || | ||| |||| || || Sbjct 337 TCATGAGAGTCGCCTTAGGTATTCACGGTGATAACATT----GAGGCCGCTCTAGAAACC 282 Query 19172 TACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGT 19231 || || ||||| || || | ||| || ||||| | || || | |||||||| ||| Sbjct 281 TATAACTTGATGTCCCTAAAATACTTTACTCACGCCTCTCCAACTTTATTCAACGCTGGT 222 Query 19232 ACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAG 19291 || || || || ||||| |||||||||||| || ||||||||||| |||||| Sbjct 221 ACACCAAAGCCTCAAATGTCCTCCTGTTTCCTAGTTGCAATGAAGGATGATTCCATTGAA 162 Query 19292 GGCATCTACGAGACGCTCAAGGAGTGCGC 19320 || |||||||| || | ||||| || || Sbjct 161 GGTATCTACGACACTTTGAAGGAATGTGC 133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548497476608400