Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21]
3,985 sequences; 11,595,011 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq3120 129 6e-25
seq1567 123 3e-23
seq2084 118 1e-21
>seq3120
Length=488
Score = 129 bits (142), Expect = 6e-25
Identities = 235/339 (69%), Gaps = 4/339 (1%)
Strand=Plus/Minus
Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGAC-TACACGCGTGTCCGTGAGACGTAC 53251
||||| | |||||||| ||||| |||||||| || | | || || || || ||
Sbjct 337 TCATGAGAGTCGCCTTAGGTATTCACGGTGATAACATTGAGGCCGCTCTA-GAAACCTAT 279
Query 53252 GACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACG 53311
|||| ||| || ||| |||||||| |||||| | ||||| | ||||||||||||||
Sbjct 278 AACTTGATGTCCCTAAAATACTTTACTCACGCCTCTCCAACTTTATTCAACGCTGGTACA 219
Query 53312 AATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGC 53371
| ||||| ||||| ||| ||||| || || ||||||||||| || || || ||
Sbjct 218 CCAAAGCCTCAAATGTCCTCCTGTTTCCTAGTTGCAATGAAGGATGATTCCATTGAAGGT 159
Query 53372 ATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATC 53431
|||||||| || | ||||| ||||| || ||||| | |||||||| ||| |
Sbjct 158 ATCTACGACACTTTGAAGGAATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGTCTA 99
Query 53432 CACTGCTC-GAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGA 53490
|| | || ||| | ||||| | |||| | || || |||||||| | |
Sbjct 98 CA-TATTCACAACATTCGTGCAACCGGCTCTTACATTGCTGGTACGAACGGGACTTCTAA 40
Query 53491 TGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGC 53529
|| | | |||||| |||| |||||||||||||| ||
Sbjct 39 CGGGTTAATTCCTATGATCCGTGTCTTCAACAACACTGC 1
>seq1567
Length=2367
Score = 123 bits (136), Expect = 3e-23
Identities = 337/511 (66%), Gaps = 10/511 (2%)
Strand=Plus/Minus
Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTG----AGACG 53248
||||||| || ||| | ||||| ||||| ||| || || ||||||| ||||
Sbjct 1763 TCATGCGTGTGGCCCTAGGTATTCACGGCAGCGA-TAT---CGAGTCCGTGCTGAAGACT 1708
Query 53249 TACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGT 53308
||| |||| ||| | ||||| || ||||| | || || || || || || |||
Sbjct 1707 TACAACTTGATGTCGTTGAGATACTTCACCCACGCTTCCCCCACACTATTTAATGCCGGT 1648
Query 53309 ACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGAC 53368
||| || ||||| ||||| || |||||| | || |||||||| ||||| || ||
Sbjct 1647 ACGCCACATCCTCAAATGTCTTCTTGTTTCCTGATTGCCATGAAGGACGACTCCATTGAA 1588
Query 53369 GGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGT 53428
|| || ||||| || | || ||||||||| || |||||| | |||||| | |||
Sbjct 1587 GGTATTTACGACACTTTGAAAGAGTGTGCCATGATTTCCAAGACTGCAGGTGGTGTTGGT 1528
Query 53429 ATCCACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCC 53488
| || | || | ||| | | ||| | || || || ||||| |
Sbjct 1527 CTTCATATCAACAATATTCGTTCCACAGGCTCTTATATTGCAGGTACCAACGGTACTTCA 1468
Query 53489 GATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGT 53548
| || | | || ||| |||| |||||||||||||| || || ||||| |||| |||
Sbjct 1467 AACGGGTTGATTCCCATGATCCGTGTCTTCAACAACACTGCACGTTACGTGGACCAAGGT 1408
Query 53549 GGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATG 53608
||| ||| | || | || ||| | | | | ||||| ||||| || ||||| |
Sbjct 1407 GGTAACAAGAGACCCGGTGCCTTTGCCCTTTTCTTGGAGCCATGGCATGCAGACATCTTC 1348
Query 53609 GAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTT 53667
|| ||| |||| | | || ||| ||| | ||||| || || ||| | || ||||
Sbjct 1347 GACTTTGTCGATATCAGAAAGACTCATGGTAAGGAAGAAATTCG-TGCAAGAGATTTGTT 1289
Query 53668 TACAGCTCTGTGGATTCCGGACCTCTTCATG 53698
| ||||| |||||||| || || ||||||
Sbjct 1288 CCCTGCTCTATGGATTCCCGATCTTTTCATG 1258
>seq2084
Length=1521
Score = 118 bits (130), Expect = 1e-21
Identities = 296/438 (68%), Gaps = 15/438 (3%)
Strand=Plus/Minus
Query 74750 GGCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCC 74809
|||||| || ||| | ||||| ||||||| |||| ||| || || || | | ||
Sbjct 920 GGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAGTTCGTTGGAGAAGGTCAAACC 861
Query 74810 AGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGAT 74869
||||| | || | ||||||||||| ||||||| |||||| || |||||||
Sbjct 860 GGGCATCATACCTCTTTTCTTCAACCAGAAGATGGAGGCGAAGGACCCGGAAAAGAAGAC 801
Query 74870 GCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAGTC----A 74925
||||||| | || || ||||| || | || ||||| | ||||||| ||| |
Sbjct 800 ACCTTCGATGGAGGCGAACGCGACCAGTCTTTCACCGAACAGGGCATCGG-CGTCCTGGA 742
Query 74926 TCCAAGTCTGAGCCCATTCAG-CTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGG 74984
|||| | | |||||||| | ||| ||| || | |||| || ||||| || | |
Sbjct 741 TCCATCTAAGGGCCCATTCGGCCTTCTCG-CAGATTTCTGGGATGGTGTCGATGGCGTTG 683
Query 74985 AAGAGG--CTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACG 75042
|| | | || || ||| ||| ||| ||||||| | |||| |||| | ||||| |
Sbjct 682 AACAAGAACTCGCTTTC-CTT-GGGGTCCTTGATGTAGGTGTCGATCAACAAGGAGTAGG 625
Query 75043 TCTCCGAATGAATCGACTCG-TTGAACGA-CTGGTACGCGTAGAAAGACCGCGCCTCTGC 75100
| || || || || |||| ||| ||| |||| || |||||||| | ||||| |
Sbjct 624 TTTCGGAGTGGATGTTCTCGATTG--CGATCTGGAACCCGTAGAAACTCTTGGCCTCCGG 567
Query 75101 AATCTGTACATCCTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGC 75160
||||| || || | || || ||| | | | || || ||||||| ||||| |||||
Sbjct 566 GATCTGGACCTCGGTGGAGAAGTTCTCGACCAAGTTTTCGTTGACGATACCGTCGGAGGC 507
Query 75161 GGCGAAAAAAGCCAGTAC 75178
|||||| || || || ||
Sbjct 506 GGCGAAGAAGGCAAGCAC 489
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547188741803000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |