Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21]
3,985 sequences; 11,595,011 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq1567 123 3e-23
seq3485 86.0 7e-12
>seq1567
Length=2367
Score = 123 bits (136), Expect = 3e-23
Identities = 288/432 (67%), Gaps = 17/432 (4%)
Strand=Plus/Plus
Query 81313 TCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCC---- 81368
|||| |||||| | |||||| |||||||||||||||| | | ||| | | ||
Sbjct 1337 TCGACAAAGTCGAAGATGTCTGCATGCCATGGCTCCAAGAAAAGGGCAAAGGCACCGGGT 1396
Query 81369 --CTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATA 81426
|||| || |||| |||| |||||||| ||||| ||| || ||||| | |||
Sbjct 1397 CTCTTGTTAC---CACCTTGGTCCACGTAACGTGCAGTGTTGTTGAAGACACGGATCATG 1453
Query 81427 GGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACC 81486
|| || | || | ||| |||||| ||||| | ||| || || ||| || |
Sbjct 1454 GGAATCAACCCGTTTGAAGTACCGTTGGTACCTGCAATATAAGAGCCTGTGGAACGAATA 1513
Query 81487 TTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATG 81546
||| |||| |||||| | ||||||| ||| |||||| |||||| ||||
Sbjct 1514 TTGTTGATATGAAGACCAACACCACCTGCAGTCTTGGAAATCATGGCACACTCTTTCAAA 1573
Query 81547 GTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATC 81606
|| || ||||| || || ||| || | |||||| ||| || |||||| |||||
Sbjct 1574 GTGTCGTAAATACCTTCAATGGAGTCGTCCTTCATGGCAATCAGGAAACAAGAAGACATT 1633
Query 81607 TGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTT 81666
||||| | | |||||||| || ||||| |||| ||||| |||| || |
Sbjct 1634 TGAGGATGTGGCGTACCGGCATTAAATAGTGTGGGGGAAGCGTGGGTGAAGTATCTCAAC 1693
Query 81667 GACATCAGGTCATAGGTTTCCTTGACGCGTGGA----ATATCGTCACCGTGAATACCGAT 81722
||||||| || || || ||| | || ||| |||||| ||||||||||| |
Sbjct 1694 GACATCAAGTTGTAAGT---CTTCA-GCACGGACTCGATATCGCTGCCGTGAATACCTAG 1749
Query 81723 AGCTACACGCAT 81734
|| ||||||||
Sbjct 1750 GGCCACACGCAT 1761
>seq3485
Length=333
Score = 86.0 bits (94), Expect = 7e-12
Identities = 83/107 (78%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || |||||||| | ||||| ||||||||||| ||||| ||||| ||
Sbjct 227 ATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTTGAAGTTGAATCTTCA 286
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAAT 27512
|| | ||||| ||| | ||| |||| ||||| |||||||| || ||
Sbjct 287 GACACCATTGACAATGTCAAGTCTAAGATTCAAGACAAGGAAGGTAT 333
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570281991413200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |