Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21] 3,985 sequences; 11,595,011 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq3282 93.3 1e-13 seq1613 86.0 1e-11 >seq3282 Length=407 Score = 93.3 bits (102), Expect = 1e-13 Identities = 187/274 (68%), Gaps = 4/274 (1%) Strand=Plus/Plus Query 7444 TTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGATTATA 7503 |||||||| || || | | ||| |||||| ||| || | | ||| | || || Sbjct 61 TTATATTTTATGTTAGCTATTTTTAGTGGTATGGCAGGAACAGCAATGTCTTTAATCATT 120 Query 7504 AGGTTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAGTGGTAATAGCCAACTTTACAAC 7563 || |||||||||||||| || ||||| ||| || || ||| ||| | | ||| Sbjct 121 AGATTAGAATTAGCTGCACCTGGTTCACAATACTTACAAGGAAATGCTCAATTATTCAAT 180 Query 7564 GTTAT--TATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGA 7621 ||| | || || ||| || || | | || |||||||| || || ||||| | | | Sbjct 181 GTTTTAGTAGTA-GGC-CACGCTGTATTAATAATTTTCTTCTTAGTAATGCCTAGTTTAA 238 Query 7622 TAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTC 7681 | || || || || |||| || | || ||||||||||||||| |||||| || || | Sbjct 239 TTGGTGGGTTTGGTAATTATTTATTACCATTAATGATTGGTGCTACTGATACAGCATTCC 298 Query 7682 CAAGGCTTAACAATATAAGTTTTTGATTACTACC 7715 |||| |||| ||||| |||||| || |||| Sbjct 299 CAAGAATTAATAATATTGCATTTTGAGTATTACC 332 >seq1613 Length=2291 Score = 86.0 bits (94), Expect = 1e-11 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529 ||| ||||||||||| ||||| || || ||||| || || |||||||| ||||||||||| Sbjct 546 GAAAATTTGACCATCTGTAATGGAAATGACATTAGTTGGAATATAAGCCGAAACATCACC 605 Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTA 4561 |||| || || | |||||| | ||| |||| Sbjct 606 ACCTTGGGTCTCAATAACAGGCAGGGCAGTTA 637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192470311965590