Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21]
3,985 sequences; 11,595,011 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq3282 93.3 1e-13
seq1613 86.0 1e-11
>seq3282
Length=407
Score = 93.3 bits (102), Expect = 1e-13
Identities = 187/274 (68%), Gaps = 4/274 (1%)
Strand=Plus/Plus
Query 7444 TTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGATTATA 7503
|||||||| || || | | ||| |||||| ||| || | | ||| | || ||
Sbjct 61 TTATATTTTATGTTAGCTATTTTTAGTGGTATGGCAGGAACAGCAATGTCTTTAATCATT 120
Query 7504 AGGTTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAGTGGTAATAGCCAACTTTACAAC 7563
|| |||||||||||||| || ||||| ||| || || ||| ||| | | |||
Sbjct 121 AGATTAGAATTAGCTGCACCTGGTTCACAATACTTACAAGGAAATGCTCAATTATTCAAT 180
Query 7564 GTTAT--TATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGA 7621
||| | || || ||| || || | | || |||||||| || || ||||| | | |
Sbjct 181 GTTTTAGTAGTA-GGC-CACGCTGTATTAATAATTTTCTTCTTAGTAATGCCTAGTTTAA 238
Query 7622 TAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTC 7681
| || || || || |||| || | || ||||||||||||||| |||||| || || |
Sbjct 239 TTGGTGGGTTTGGTAATTATTTATTACCATTAATGATTGGTGCTACTGATACAGCATTCC 298
Query 7682 CAAGGCTTAACAATATAAGTTTTTGATTACTACC 7715
|||| |||| ||||| |||||| || ||||
Sbjct 299 CAAGAATTAATAATATTGCATTTTGAGTATTACC 332
>seq1613
Length=2291
Score = 86.0 bits (94), Expect = 1e-11
Identities = 74/92 (80%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529
||| ||||||||||| ||||| || || ||||| || || |||||||| |||||||||||
Sbjct 546 GAAAATTTGACCATCTGTAATGGAAATGACATTAGTTGGAATATAAGCCGAAACATCACC 605
Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTA 4561
|||| || || | |||||| | ||| ||||
Sbjct 606 ACCTTGGGTCTCAATAACAGGCAGGGCAGTTA 637
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192470311965590
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |