Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21] 3,985 sequences; 11,595,011 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq1567 343 2e-89 seq3120 136 5e-27 seq2589 114 2e-20 >seq1567 Length=2367 Score = 343 bits (380), Expect = 2e-89 Identities = 1240/1919 (65%), Gaps = 48/1919 (3%) Strand=Plus/Plus Query 76778 CAATG-TAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTT 76836 ||||| |||| ||||| | | ||| |||| || ||| | | ||||||||||| || | Sbjct 6 CAATGGTAAATTGAATGGCTGCAGAAGCGGCTTGTGTTCTCAAGTAGTACATACCCGTCT 65 Query 76837 TTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACT-AGGATCG 76895 | | |||| |||| |||||||||||||| ||||| | ||| | | | | | | | Sbjct 66 TCAAACCCTTCTTCCAACCGTAGAAATGCATACTTGTAATTTT--ACCCATTGATGGT-G 122 Query 76896 GCTATATGAATA--TTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCA 76953 | || ||| | |||| || || |||||| ||| || | |||||| |||| Sbjct 123 ATTGTAGGAACAAATTCAAGGAGTGGGATTGATCAATGTAAATGGAACGATCAGCAGCCA 182 Query 76954 TTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCAT 77013 | || ||||| |||||||||| |||||||| | |||||| | | | ||| | ||| | Sbjct 183 TGTTGATAATAGTCTTTTGAGAGATTTCCCAGACAGTTTTATATAGATCTTTCAAATCTT 242 Query 77014 CTGGAAGGTTTGT---ATTTTGAATGGAACCACCATCTGATATAATTG--TATTCTTT-A 77067 |||| ||||| || || |||||| ||| | ||| |||| |||| ||| | Sbjct 243 GAGGAACGTTTGGTAAATCTTTAATGGAGCCAT--TTTGAG-TAATCAAATATTGTTTCA 299 Query 77068 TATCATCATTCCACAATTTCCTC-TCTGTTAAAACTCTAAGGAGATGAGGATTAACTATT 77126 || ||||| ||| ||| || || |||| | | || | | ||||| || | | Sbjct 300 TACTATCATCCCA-AATGCCCAGATCGACTAAATCACGTAGTAAGTATGGATTGACGACT 358 Query 77127 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 77186 || ||||| ||||| || || | ||||| ||| || || || |||||| | | | Sbjct 359 TGGAATTCACCAGATAAGACACGACGAGAGTACATGTTTGAAGTGACTGGTTCGAAACAC 418 Query 77187 TCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTA 77246 ||||||| || | |||||| | || ||||| |||||||| || |||| |||| Sbjct 419 TCATTGTACCCAAGAATTTGGGATGTTGAAGCGGTTGGCATTGGGGCCATGGTTAAAGAG 478 Query 77247 TTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAA 77306 ||||| | |||||| | || | | || | | | ||||||||| | | | Sbjct 479 TTTCTTAACCCATGTTTCACAATGTCCTTCTTCAAAGTGTCCCAATCCCACATGCCAAAT 538 Query 77307 GGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATAT 77366 || | ||| ||| | ||| | |||| ||| || ||| ||| || || | | | Sbjct 539 GGCTTAGCATTCCACATGTCGAACTGTAAAATACCCTTAGAGGCAGGAGAGCCTTCAAAA 598 Query 77367 GTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAA 77426 || ||| ||||| ||| ||||| |||||| ||||| | | | | ||| Sbjct 599 GTGGAATATTTACCTTCCTTTTGAGCTAACTCACAAGAAGCTTCAAGGGTAGCATGGTAA 658 Query 77427 ATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGT 77486 || ||||||||||| | ||||| || ||| |||| || ||||| || || | Sbjct 659 ATAGTTTCGAAAATTTGTTTATTAAGTATTTGAGCTTTTTCACATTCAAATGGTAAACGC 718 Query 77487 AAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTA 77546 | | ||| | | ||| || || || ||||| || | |||||||||||||| || | Sbjct 719 AGCATCATATAAGTATCGGCCAAACCTTGAACCCCCAGGGCAATAGGTCTATGTTTCATG 778 Query 77547 TTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTT 77606 || || || |||| ||||| | |||||||| ||| ||| || | | |||| | || Sbjct 779 TTAGAGTTTCTAGCCTCTGGCACTGGATAATAGTTACGGTCGATGACTCTATTCAAGTTA 838 Query 77607 CTAACAACTACTTTAACCACGTCCTTTAGT-TTAAGAAAATCAA---------------A 77650 | | |||||| | | ||| | || || |||| | | | Sbjct 839 TGAGTGATGACTTTAGCAATGTCATGTAAACTTTGGAAATTGTAGGTCGCCGTTTTACCA 898 Query 77651 TCTTCCA---TCTATAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTAC 77707 |||||| ||| | || || | | ||| || || |||| ||||||||| || Sbjct 899 TCTTCCGAAGTCTCAACGAATGCTGGT-AGAGCAATGGAAGCTAAATTACAAACAGCAGT 957 Query 77708 CTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCC 77767 |||| | | | ||| | | || ||| ||| | || ||||||| || || Sbjct 958 TTCATCTGGGGAAGAATACTCGACGATTTCGCAACACAAGTTTGACGATTTGATGGTACC 1017 Query 77768 CAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCC 77827 ||| || ||||||||| ||||| | || || | |||||||||| || || || || || Sbjct 1018 CAGGTTCTGTTGGTTGGTCTTTCTGTTACAGGCATCCTTATAAACCATGAAGGGTGTACC 1077 Query 77828 GGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATCATAGATTT 77887 |||||| | |||| || | || | | ||| || | ||| || || | ||| Sbjct 1078 GGTTTCTGTTTGTGCTTGCAAGATGGCGTACCATACCTTTTGAGCCTTGATGGT---TTT 1134 Query 77888 GTATCGCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATC 77947 || | |||||||| || | ||||||||| ||| ||||| || |||||||| || Sbjct 1135 ACCACGACCTTCTCTTTCGTAACGGGTATATAGCTCTTCGAATTCTTCACCCCAAACGTC 1194 Query 77948 ATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCG 78007 ||||| || ||| || |||| | | || | |||| | ||||| || | || || Sbjct 1195 GTCCAAACCTGGGGCAGCACTTGGTGAGAATAAGGTCCAGGCCCCATCCTCTTCGACACG 1254 Query 78008 TTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTC 78067 ||||| || ||||| || |||||||||||| || | ||||| | | | |||||| Sbjct 1255 CTTCATGAAAAGATCGGGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCTTC 1314 Query 78068 ATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAG 78127 || || | ||||| | | ||||| ||| || | || || | ||||||||| || | Sbjct 1315 CTTACCATGAGTCTTTCTGATATCGACAAAGTCGAAGATGTCTGCATGCCATGGCTCCAA 1374 Query 78128 ATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTT 78187 | | || | | || |||| || ||||| || || || | || | || ||||| Sbjct 1375 GAAAAGGGCAAAGGCACCGGGTCTCTTGTTACCACCTTGGTCCACGTAACGTGCAGTGTT 1434 Query 78188 ATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATA 78247 || | || | | ||| ||||| | ||||| || || || || || || | |||||| Sbjct 1435 GTTGAAGACACGGATCATGGGAATCAACCCGTTTGAAGTACCGTTGGTACCTGCAATATA 1494 Query 78248 ACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATAT 78307 | || | | |||||||| | || | || | || ||||| |||| || || Sbjct 1495 AGAGCCTGTGGAACGAATATTGTTGATATGAAGACCAACACCACCTGCAGTCTTGGAAAT 1554 Query 78308 TAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAG 78367 | || || |||||| || ||||| ||||| || || ||| ||| ||||| || Sbjct 1555 CATGGCACACTCTTTCAAAGTGTCGTAAATACCTTCAATGGAGTCGTCCTTCATGGCAAT 1614 Query 78368 AAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGC 78427 || ||||| |||||||||| |||| || || |||||||||| ||| || || || Sbjct 1615 CAGGAAACAAGAAGACATTTGAGGATGTGGCGTACCGGCATTAAATAGTGTGGGGGAAGC 1674 Query 78428 ATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGT-TTCAATAGCTGATTCTATGTCCC 78486 || || || || | || | | ||||| || |||| | | || || || || | Sbjct 1675 GTGGGTGAAGTATCTCAACGACATCAAGTTGTAAGTCTTCAGCA-CGGACTCGATATCGC 1733 Query 78487 ATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTAT 78546 ||||| |||| || |||||||| | || ||| || || | ||| || | | Sbjct 1734 TGCCGTGAATACCTAGGGCCACACGCATGACCAAATGTTGGGGACGTTCGGCCACTTCAC 1793 Query 78547 TATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGA 78604 | || | | | || ||| || ||||| ||| ||||| ||||||||| |||| ||| Sbjct 1794 CGTCTAGTCTTAGCAGGTA-GAACGTTCCAGAGTCTTAAACCCAAAATAGGTGTACTTGA 1852 Query 78605 AAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTAACAATAT 78663 || ||||| ||||| | || | || || || ||||||||| || | ||||||| Sbjct 1853 AA--TCTCTGTCGTACACGATGGCCGAGTTCAGCGTATCTTTGTTTTCCATGACAATAT 1909 >seq3120 Length=488 Score = 136 bits (150), Expect = 5e-27 Identities = 325/486 (67%), Gaps = 4/486 (1%) Strand=Plus/Plus Query 78180 GCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCA 78239 || ||||| || | || | | ||| ||||| | |||||||| || || || || ||| Sbjct 1 GCAGTGTTGTTGAAGACACGGATCATAGGAATTAACCCGTTAGAAGTCCCGTTCGTACCA 60 Query 78240 GAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATC 78299 | ||| ||| || |||| ||||| || ||| || || || || || || | Sbjct 61 GCAATGTAAGAGCCGGTTGCACGAATGTTGTGAATATGTAGACCAATACCACCAGCAGTT 120 Query 78300 TTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATC 78359 || || || | ||| || ||||| || ||||||||||| || || |||||| || Sbjct 121 TTGGAAATCAAAGCACATTCCTTCAAAGTGTCGTAGATACCTTCAATGGAATCATCCTTC 180 Query 78360 ATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTC 78419 || || || |||||| ||||||||| | | || || || || ||||| || Sbjct 181 ATTGCAACTAGGAAACAGGAGGACATTTGAGGCTTTGGTGTACCAGCGTTGAATAAAGTT 240 Query 78420 GGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCT 78479 ||||| || || ||||| ||||| || | | || || ||||| | ||| | || Sbjct 241 GGAGAGGCGTGAGTAAAGTATTTTAGGGACATCAAGTTATAGGTTTCTAGAGCGGCCTCA 300 Query 78480 ATG-TCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAAC 78538 ||| | || | ||||| |||| || || | ||| | | || || || | |||| | Sbjct 301 ATGTTATCACCG-TGAATACCTAAGGCGACTCTCATGATTAAGTGTTGTGGACGTTCAGC 359 Query 78539 CGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTT 78598 | | || | | |||| ||||| || ||| |||||||||||||| || || | Sbjct 360 AACTTGACCGTTGACTCTCAATAAGTACGAACGTTCTAAAGTTTTAAAACCGAAGTAACT 419 Query 78599 GTA-TGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTAA 78657 ||| |||||| ||||| || || | |||| | || ||||||||||| |||| || | | Sbjct 420 GTACTGAAAA-TCTCTGTCATAGACAATAGCTGAGTTTAGTTTATCCTTGTTTTCCATGA 478 Query 78658 CAATAT 78663 |||||| Sbjct 479 CAATAT 484 >seq2589 Length=927 Score = 114 bits (126), Expect = 2e-20 Identities = 312/478 (65%), Gaps = 0/478 (0%) Strand=Plus/Minus Query 77115 GGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATAT 77174 ||||| || | ||||||||| ||||| | || | ||||| ||| || || ||| | Sbjct 918 GGATTGACGACTTGAAATTCACCAGATAGAACACGACGAGAGTACATGTTGGAAGTAACT 859 Query 77175 GGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCC 77234 ||||| | | | || |||| || ||||| || | ||| || ||||| |||||||||||| Sbjct 858 GGTTCGAAACACTCGTTGTAACCTAAAATCTGGGAAGTGGATGCAGTAGGCATAGGTGCC 799 Query 77235 ACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCC 77294 | ||| ||||| | |||||| | |||| | || | | | | | ||||||| Sbjct 798 ATGGTCAAAGAGTTTCTAACACCATGCTTCATGATGTCATTTCTCAAAGTATCCCAATCC 739 Query 77295 CAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATAT 77354 || | | | ||||| | ||||| | ||| |||| || || || | | ||| Sbjct 738 CACATACCGTAAGGTTTTTCGTCCCACATGTCGAATTGAAGTATACCTTGAGAAGCTGGA 679 Query 77355 GATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAAT 77414 || || | | ||||| || || || ||| ||| |||||| |||||| ||||||| Sbjct 678 GAGCCTTGGAAGGTTTCGTATGGGCCATCTCTTTGAGCTAGCTCACAAGAGGCTTCCATG 619 Query 77415 GCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCA 77474 | | | || || ||||| || || | |||| || ||||||| || Sbjct 618 GAAGCATGGTACATGGTTTCAAAGATTTGTATATTTAGTAAGCGTGCTTCTTCGGAGTCG 559 Query 77475 AACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGT 77534 || || || | || | || || | || || || || || || || | | |||| || Sbjct 558 AATGGTAAACGCAACAACATGAAAGTGTCAGCCAAACCTTGGACACCCAAAGCAATCGGC 499 Query 77535 CTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAA 77592 || |||||| |||| || || | ||||| | ||||||||| ||| ||| |||| Sbjct 498 CTGTGTCTCATATTAGATCTTCTTGCTTCCTCGACAGGATAATAGTTACGGTCAATAA 441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694634196810400