Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21] 3,985 sequences; 11,595,011 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq1567 269 4e-67 seq3120 154 2e-32 >seq1567 Length=2367 Score = 269 bits (298), Expect = 4e-67 Identities = 1221/1915 (64%), Gaps = 49/1915 (3%) Strand=Plus/Plus Query 75377 GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 75436 || || ||||||| | || || | || ||| | | ||||||||||| || || | | Sbjct 11 GTAAATTGAATGGCTGCAGAAGCGGCTTGTGTTCTCAAGTAGTACATACCCGTCTTCAAA 70 Query 75437 CCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGA-ATAACTCG-GATCGGCTA 75494 ||| |||| |||||||||||||| ||||| | ||| || | | ||| | Sbjct 71 CCCTTCTTCCAACCGTAGAAATGCATACTTGTAATTTTACCCATTGATGGTGATTG---- 126 Query 75495 TATGAATA--TTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTT 75552 || ||| | |||| || || |||||| ||| || | |||||| ||||| || Sbjct 127 TAGGAACAAATTCAAGGAGTGGGATTGATCAATGTAAATGGAACGATCAGCAGCCATGTT 186 Query 75553 TATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGG 75612 ||||| |||||||||| |||||||| | |||||| | | | ||| | ||| | || Sbjct 187 GATAATAGTCTTTTGAGAGATTTCCCAGACAGTTTTATATAGATCTTTCAAATCTTGAGG 246 Query 75613 AAGATTTGT---ATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTG-ATCTCAT 75668 || |||| || || |||||| || | || || | |||| || || || Sbjct 247 AACGTTTGGTAAATCTTTAATGGAGCCATTTTGAGTAATCAAA-TATTGTTTCATACTAT 305 Query 75669 CATTCCACAATTTTCTC-TCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAAT 75727 ||| ||| ||| | ||| |||| | | || | | ||||| || | ||| ||| Sbjct 306 CATCCCA-AATGCCCAGATCGACTAAATCACGTAGTAAGTATGGATTGACGACTTGGAAT 364 Query 75728 TCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTG 75787 || ||||| || || | |||| ||| || || || |||||| | | | |||||| Sbjct 365 TCACCAGATAAGACACGACGAGAGTACATGTTTGAAGTGACTGGTTCGAAACACTCATTG 424 Query 75788 TTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTG 75847 | || | |||||| | |||||||| || ||||| || |||| |||| ||||| Sbjct 425 TACCCAAGAATTTGGGATGTTGAAGCGGTTGGCATTGGGGCCATGGTTAAAGAGTTTCTT 484 Query 75848 AGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACA 75907 | |||||| | || | | || | | | ||||||||| | | |||| | Sbjct 485 AACCCATGTTTCACAATGTCCTTCTTCAAAGTGTCCCAATCCCACATGCCAAATGGCTTA 544 Query 75908 ACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTATATGTTTCG 75967 ||| ||| | ||| | |||| ||| || || ||| || || | | | || Sbjct 545 GCATTCCACATGTCGAACTGTAAAATACCCTTAGAGGCAGGAGAGCCTTCAAAAGTGGAA 604 Query 75968 TAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTT 76027 || | || ||||||| ||||| || ||| || || | | | | | ||||| ||| Sbjct 605 TATTTACCTTCCTTTTGAGCTAACTCACAAGAAGCTTCAAGGGTAGCATGGTAAATAGTT 664 Query 76028 TCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAGA 76087 |||||||| | |||||||| ||| |||| || ||||| || || | | | Sbjct 665 TCGAAAATTTGTTTATTAAGTATTTGAGCTTTTTCACATTCAAATGGTAAACGCAGCATC 724 Query 76088 ATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAA 76147 ||| | | ||| || | || ||||| || | |||||||||||||| || | || || Sbjct 725 ATATAAGTATCGGCCAAACCTTGAACCCCCAGGGCAATAGGTCTATGTTTCATGTTAGAG 784 Query 76148 ATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTCTGACA 76207 || ||| ||||| | || ||||| ||| || || | | |||| | | || ||| Sbjct 785 TTTCTAGCCTCTGGCACTGGATAATAGTTACGGTCGATGACTCTATTCA-AGTTATGAGT 843 Query 76208 ACT-ACTTTAACCACGTCCTTTAG--TTTGAGAAAATCAAA--------TTTTCCATCTA 76256 | |||||| | | ||| | || |||| |||| | | ||| |||||| Sbjct 844 GATGACTTTAGCAATGTCATGTAAACTTTG-GAAATTGTAGGTCGCCGTTTTACCATCTT 902 Query 76257 TCACA-----AACATATTA----AGAGCTATAGATGCTAGATTACAAACGGCTACCTCAT 76307 | | ||| || ||||| || || |||| ||||||||| || |||| Sbjct 903 CCGAAGTCTCAACGAATGCTGGTAGAGCAATGGAAGCTAAATTACAAACAGCAGTTTCAT 962 Query 76308 TAGCATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGAT 76367 | | ||| | | || || || | || | ||||| || || || | Sbjct 963 CTGGGGAAGAATACTCGACGATTTCGCAACACAAGTTTGACGATTTGATGGTACCCAGGT 1022 Query 76368 TTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTT 76427 | ||||||||| ||||| ||||||| | |||||||||| | || || || || |||| Sbjct 1023 TCTGTTGGTTGGTCTTTCTGTTACAGGCATCCTTATAAACCATGAAGGGTGTACCGGTTT 1082 Query 76428 CAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATTATAGATTTGTATC 76487 | | |||| || | || | | ||| || | ||| || || | ||| || | Sbjct 1083 CTGTTTGTGCTTGCAAGATGGCGTACCATACCTTTTGAGCCTTGAT----GGTTT-TACC 1137 Query 76488 GCTTC--TCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATC 76545 | | |||||||| || | ||||||| | ||| ||||| || |||||||| || || Sbjct 1138 ACGACCTTCTCTTTCGTAACGGGTATATAGCTCTTCGAATTCTTCACCCCAAACGTCGTC 1197 Query 76546 CAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTT 76605 |||||| || || | || | | || | ||| | ||||| || | || || || Sbjct 1198 CAAACCTGGGGCAGCACTTGGTGAGAATAAGGTCCAGGCCCCATCCTCTTCGACACGCTT 1257 Query 76606 CATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATT 76665 ||| || ||||| || |||||||||||| || | ||||| | | | |||||| || Sbjct 1258 CATGAAAAGATCGGGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCTTCCTT 1317 Query 76666 TCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATA 76725 || | ||||| | | ||| | || || | || || | ||||||||| || | | Sbjct 1318 ACCATGAGTCTTTCTGATATCGACAAAGTCGAAGATGTCTGCATGCCATGGCTCCAAGAA 1377 Query 76726 TATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATT 76785 | || | |||| |||| || ||||| || || || | || | |||||||| || Sbjct 1378 AAGGGCAAAGGCACCGGGTCTCTTGTTACCACCTTGGTCCACGTAACGTGCAGTGTTGTT 1437 Query 76786 ATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACT 76845 | || | | ||| ||||| | ||||| || ||||| || || || | ||||||| Sbjct 1438 GAAGACACGGATCATGGGAATCAACCCGTTTGAAGTACCGTTGGTACCTGCAATATAAGA 1497 Query 76846 TCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAG 76905 || | ||||||||| | ||| || || | || ||||| | || || || | Sbjct 1498 GCCTGTGGAACGAATATTGTTGATATGAAGACCAACACCACCTGCAGTCTTGGAAATCAT 1557 Query 76906 AGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAG 76965 ||||| |||||| ||||| || || || || || || ||| ||||| || || Sbjct 1558 GGCACACTCTTTCAAAGTGTCGTAAATACCTTCAATGGAGTCGTCCTTCATGGCAATCAG 1617 Query 76966 AAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATG 77025 ||||| |||||||||| |||| || || |||||||| | ||| || || || || Sbjct 1618 GAAACAAGAAGACATTTGAGGATGTGGCGTACCGGCATTAAATAGTGTGGGGGAAGCGTG 1677 Query 77026 AGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTG 77085 ||||| || | || | | ||||| || | | || | || ||||| | Sbjct 1678 GGTGAAGTATCTCAACGACATCAAGTTGTAAGTCTTCAGCACGGACTCGATATCGCTGCC 1737 Query 77086 ATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATT 77145 ||||| |||| || |||||||| | || ||| || || ||||| | | | | Sbjct 1738 GTGAATACCTAGGGCCACACGCATGACCAAATGTTGGGGACGTTCGGCCACTTCACCGTC 1797 Query 77146 TATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAG 77203 || | | | || ||| || ||||| ||| ||||| ||||||||| |||| ||||| Sbjct 1798 TAGTCTTAGCAGGTA-GAACGTTCCAGAGTCTTAAACCCAAAATAGGTGTACTTGAAA-- 1854 Query 77204 TCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTTGGTAACAATAT 77258 ||||| ||||| | || |||| || || | || || | || | ||||||| Sbjct 1855 TCTCTGTCGTACACGATGGCCGAGTTCAGCGTATCTTTGTTTTCCATGACAATAT 1909 >seq3120 Length=488 Score = 154 bits (170), Expect = 2e-32 Identities = 329/486 (68%), Gaps = 4/486 (1%) Strand=Plus/Plus Query 76775 GCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCA 76834 |||||||| || | || | | ||| ||||| | |||||||| || || || || ||| Sbjct 1 GCAGTGTTGTTGAAGACACGGATCATAGGAATTAACCCGTTAGAAGTCCCGTTCGTACCA 60 Query 76835 GAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATT 76894 | ||| ||| || ||||||||| || |||| ||| || || || || || || Sbjct 61 GCAATGTAAGAGCCGGTTGCACGAATGTTGTGAATATGTAGACCAATACCACCAGCAGTT 120 Query 76895 TTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATC 76954 || || || | |||||| ||||| ||||| ||||| || || || ||||||| || Sbjct 121 TTGGAAATCAAAGCACATTCCTTCAAAGTGTCGTAGATACCTTCAATGGAATCATCCTTC 180 Query 76955 ATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTA 77014 || || || |||||| ||||||||| | | || || || || || || || Sbjct 181 ATTGCAACTAGGAAACAGGAGGACATTTGAGGCTTTGGTGTACCAGCGTTGAATAAAGTT 240 Query 77015 GGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCT 77074 ||||| || ||||| || ||||| || | | || || ||||| | | | || || Sbjct 241 GGAGAGGCGTGAGTAAAGTATTTTAGGGACATCAAGTTATAGGTTTCTAGAGCGGCCTCA 300 Query 77075 ATATCC-CATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTAC 77133 || | || | ||||| |||| ||||| | ||| | | || || || ||||| | Sbjct 301 ATGTTATCACCG-TGAATACCTAAGGCGACTCTCATGATTAAGTGTTGTGGACGTTCAGC 359 Query 77134 AGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTT 77193 | | | || | | |||| ||||| || ||| |||||||||||||| || || | Sbjct 360 AACTTGACCGTTGACTCTCAATAAGTACGAACGTTCTAAAGTTTTAAAACCGAAGTAACT 419 Query 77194 GTA-TGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTTGGTAA 77252 ||| |||||| ||||| || || | |||| | || |||||||| ||||| | || | | Sbjct 420 GTACTGAAAA-TCTCTGTCATAGACAATAGCTGAGTTTAGTTTATCCTTGTTTTCCATGA 478 Query 77253 CAATAT 77258 |||||| Sbjct 479 CAATAT 484 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712898886955200