Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242635.1_202017-08-07] 55 sequences; 11,656,823 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq17 104 2e-17 seq28 91.5 1e-13 >seq17 Length=83854 Score = 104 bits (114), Expect = 2e-17 Identities = 152/212 (72%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTA---TCC 118586 |||||||| | || ||||||||||||||||||||||| |||| | | || || Sbjct 56197 ACCAAGTGAAGAGTGGACTCTTTTTGAATGTTGTAATCCG--ATAGCGTTC-TACCGTCT 56253 Query 118587 TCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCT 118646 || || ||||| |||||| | || | | ||| || || ||||| || || |||||||| Sbjct 56254 TCCAGTTGTTTACCAGCGAAAATCAACCTCTGTTGGTCCGGAGGAATACCTTCCTTGTCC 56313 Query 118647 GTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTT 118706 || || || || | |||| |||||| | || ||||| | ||| | || Sbjct 56314 TGGATCTTAGACTTGACGTTATCGATGGTGTCAGAATATTCAACCTCCAAGGTTATGGTC 56373 Query 118707 TTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || |||||||||||||| |||||||||||||| Sbjct 56374 TTACCGGTCAGAGTTTTGACAAAAATCTGCAT 56405 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | || ||| | |||||||| | ||||| || ||||||||||||||||| Sbjct 56405 TACCACCTCTTAGTCTTAGGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCCG 56464 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || || | ||| || | |||||| || || | || | | ||| || || || | Sbjct 56465 ACAGCGTTCTACCATCTTCCAACTGTTTACCTGCAAAAATCAATCTCTGTTGGTCTGGTG 56524 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || |||||||| || || || || | || | |||||| | |||| Sbjct 56525 GAATACCTTCCTTGTCCTGGATCTTACTCTTCACATTGTCTATGGTGTCAGAAGATTCGA 56584 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| | || | || || || || |||||||| |||||||||||||| Sbjct 56585 CCTCCAAAGTGATAGTCTTACCAGTTAGAGTTTTGACAAAAATCTGCAT 56633 >seq28 Length=374213 Score = 91.5 bits (100), Expect = 1e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 44855 GAACGATTGGTCGCATTCGCCATTGTCGAAGGAGTGTTCTTTTCGGGGAGTTTTGCGGCG 44914 ||| || ||||||| |||||| ||||||| || ||||| || ||| || || | Sbjct 39758 GAAAGACTGGTCGCGTTCGCCTCCATCGAAGGTGTCTTCTTCTCCGGGTCCTTCGCCTCC 39817 Query 44915 ATATTTTACATGAAAACCAAGGGAGTGATGCCCGGACTGACGTTTAGCAACGAATTGATT 44974 || || | |||| | | || |||||||||| |||| || ||||||| |||| Sbjct 39818 ATCTTCTGGTTGAAGAAAAGAGGTATGATGCCCGGTTTGACCTTCTCCAACGAACTGATC 39877 Query 44975 TCGAGAGACGAAGGTCTGCACACCAACTTTGCCTG 45009 | |||||||||||| |||||||| |||||||||| Sbjct 39878 TGCAGAGACGAAGGTTTGCACACCGACTTTGCCTG 39912 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433830109198060