Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242635.1_202017-08-07]
55 sequences; 11,656,823 total letters
Query= NC_002520.1
Length=232392
Score E
Sequences producing significant alignments: (Bits) Value
seq20 107 3e-18
seq26 102 1e-16
seq17 102 1e-16
seq13 95.1 2e-14
>seq20
Length=304555
Score = 107 bits (118), Expect = 3e-18
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | ||| || ||||| |||||||| || || || || || || || ||
Sbjct 8897 CCACCTCTCAATCTCAAGACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 8838
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| |||||||| || || ||||| || |||||||| ||||||||||| || || || |||
Sbjct 8837 AAAGTTCTGCCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 8778
Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230
|| ||||| || ||||| || |||||| ||| |||
Sbjct 8777 ATACCTTCCTTGTCTTGAATCTTAGACTTGACATTGTCAATGGTGTCTGAAGATTCAACT 8718
Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATTTT 146280
|| || || || || ||||| ||||| || || | ||| |||||||| ||
Sbjct 8717 TCAAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 8668
>seq26
Length=194426
Score = 102 bits (112), Expect = 1e-16
Identities = 107/138 (78%), Gaps = 2/138 (1%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATT-CTTTAGATATATTATAATCTGA 146109
|||||||| | ||| || || ||||||||||| |||| |||| || || || || || ||
Sbjct 158875 CCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGA-ATGTTGTAGTCGGA 158933
Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169
| ||||| | || || ||||| || |||||||| ||||||||||| || || || ||
Sbjct 158934 CAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 158993
Query 146170 AATTCCTTCTTTATCTTG 146187
|| |||||||| |||||
Sbjct 158994 GATACCTTCTTTGTCTTG 159011
>seq17
Length=83854
Score = 102 bits (112), Expect = 1e-16
Identities = 107/138 (78%), Gaps = 2/138 (1%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109
|||||||| ||||| | ||||| || | |||||||| ||| || || ||||| |||||
Sbjct 55951 CCACCTCTTAGTCTCAGGACCAAGTGAAGGGTAGATTCCTTTTGA-ATGTTATAGTCTGA 56009
Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169
|| ||||| | ||| || | |||||| || |||||||||||||| || || || || ||
Sbjct 56010 CAGCGTTCTACCATCTTCCAGTTGTTTCCCTGCAAAAATCAATCTCTGTTGGTCTGGTGG 56069
Query 146170 AATTCCTTCTTTATCTTG 146187
||| ||||| || || ||
Sbjct 56070 AATACCTTCCTTGTCCTG 56087
Score = 102 bits (112), Expect = 1e-16
Identities = 107/138 (78%), Gaps = 2/138 (1%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109
|||||||| ||||||| ||||| || | |||||||| ||| || || || ||||| ||
Sbjct 56407 CCACCTCTTAGTCTTAGGACCAAGTGAAGGGTAGATTCCTTTTGA-ATGTTGTAATCCGA 56465
Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169
|| ||||| | ||| || || ||||| || |||||||||||||| || || || || ||
Sbjct 56466 CAGCGTTCTACCATCTTCCAACTGTTTACCTGCAAAAATCAATCTCTGTTGGTCTGGTGG 56525
Query 146170 AATTCCTTCTTTATCTTG 146187
||| ||||| || || ||
Sbjct 56526 AATACCTTCCTTGTCCTG 56543
Score = 98.7 bits (108), Expect = 1e-15
Identities = 106/138 (77%), Gaps = 2/138 (1%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109
|||||||| || |||| ||||| || | ||| ||||| ||| || || || ||||| ||
Sbjct 56635 CCACCTCTTAGCCTTAGGACCAAGTGAAGAGTGGATTCCTTTTGA-ATGTTGTAATCCGA 56693
Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169
|| ||||| | || || | |||||| ||||| |||||||| || || || ||||||||
Sbjct 56694 CAGCGTTCTACCGTCTTCCAGTTGTTTACCAGCGAAAATCAACCTCTGTTGGTCCGGAGG 56753
Query 146170 AATTCCTTCTTTATCTTG 146187
||| ||||| || || ||
Sbjct 56754 AATGCCTTCCTTGTCCTG 56771
Score = 95.1 bits (104), Expect = 2e-14
Identities = 103/137 (75%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| || |||| ||||| || | ||| || ||||| || || ||||| ||
Sbjct 56179 CCACCTCTTAGCCTTAGGACCAAGTGAAGAGTGGACTCTTTTTGAATGTTGTAATCCGAT 56238
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|| ||||| | || || | |||||| ||||| |||||||| || || || |||||||||
Sbjct 56239 AGCGTTCTACCGTCTTCCAGTTGTTTACCAGCGAAAATCAACCTCTGTTGGTCCGGAGGA 56298
Query 146171 ATTCCTTCTTTATCTTG 146187
|| ||||| || || ||
Sbjct 56299 ATACCTTCCTTGTCCTG 56315
>seq13
Length=154029
Score = 95.1 bits (104), Expect = 2e-14
Identities = 103/137 (75%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | ||| || || ||||||||||| ||||| || || || || || ||
Sbjct 46849 CCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAC 46790
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| ||||| | || || ||||| || |||||||| || |||||||| || || |||||
Sbjct 46789 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAGGG 46730
Query 146171 ATTCCTTCTTTATCTTG 146187
|| ||||| || |||||
Sbjct 46729 ATACCTTCCTTGTCTTG 46713
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 743525888825600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |