Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242635.1_202017-08-07] 55 sequences; 11,656,823 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq28 120 6e-22 >seq28 Length=374213 Score = 120 bits (132), Expect = 6e-22 Identities = 283/426 (66%), Gaps = 15/426 (4%) Strand=Plus/Plus Query 101936 GAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGATCAAGAACAGGGGTATT 101995 ||||| ||||||| || | ||||| ||||| |||||| | ||||| || ||||| Sbjct 39785 GAAGGTGTCTTCTTCTCCGGGTCCTTCGCCTCCATCTTCTGGTTGAAGAAAAGAGGTATG 39844 Query 101996 TTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACGAAGGTCTTCATCGCGAC 102055 |||| ||| | |||| |||||| || | || | || ||||||||| | || |||| Sbjct 39845 ATGCCCGGTTTGACCTTCTCCAACGAACTGATCTGCAGAGACGAAGGTTTGCACACCGAC 39904 Query 102056 TTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCATCAAGAGAAAGGATTCTT 102115 ||||| || || |||| | |||| | | | | || || || | Sbjct 39905 TTTGCCTGTTTGTTGTTCGCCCAC-------TTGAAAAACAAGCCGGACCCAGCCATCGT 39957 Query 102116 G----AAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTCTCACAGTTTCCCTGCC 102171 |||| ||||| || |||||| || |||||| || || || || |||| Sbjct 39958 CGAGAAAATCGTCACCGAGGCCGTCGAGATCGAACAAAGATACTTCCTAGACGCCTTGCC 40017 Query 102172 TGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACATTGAATTTGTGGCAGA 102231 || || | || |||||| | | ||||||| ||| ||| | || || || ||||| Sbjct 40018 AGTCGCCTTGCTAGGTATGAACGCCGACTTGATGAACCAATACGTCGAGTTCGTCGCAGA 40077 Query 102232 TAAACTATTGGTTGAAATGGG--ACTAGAAAAGCACTATAATGTTACCAACCCCTTCCCA 102289 | ||| ||||| | | || || |||| | |||| || || |||||||||| Sbjct 40078 CAGACTCTTGGTCGCCTTCGGTAACAAGAA--GTACTACAAGGTCGACAACCCCTTCGAT 40135 Query 102290 TTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGAAAAGAGAGTCGCCGAG 102349 |||||||| || |||||| | | |||||||||||| || |||||||||||| |||| Sbjct 40136 TTCATGGAAAACATTTCCTTGGCCGGTAAGACCAACTTCTTCGAAAAGAGAGTCTCCGAC 40195 Query 102350 TATCAA 102355 || ||| Sbjct 40196 TACCAA 40201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583302652525