Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242635.1_202017-08-07]
55 sequences; 11,656,823 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq4 170 2e-37
seq14 132 5e-26
>seq4
Length=235297
Score = 170 bits (188), Expect = 2e-37
Identities = 520/791 (66%), Gaps = 21/791 (3%)
Strand=Plus/Minus
Query 36790 TCAACTGTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTT 36849
|||| || |||| |||| | || || | || |||||||| ||||||||| || ||
Sbjct 179102 TCAATGGTAAATTGAATAGCAGCAGAAGCGGCTTGTGTTCTCAAATAATACATACCGGTC 179043
Query 36850 TTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTA 36909
||||| || |||| ||||| ||||||||||| || || || | || || |
Sbjct 179042 TTTAGACCTTTCTTCCAACCGTAGAAATGCATACTTGTTAGCTTACCCATGGTTGGGGCA 178983
Query 36910 TCTATATATATTGTCATTGATTGACTTTGATCTAT--AAACGCACCTCTGTCGGCTGCCA 36967
| ||| ||| || || |||||| || ||||| | | |||||||||||
Sbjct 178982 CGCAAGAATAAATTCAAAGAATGGGATTGATCGATGTAAACGG--CACGGTCGGCTGCCA 178925
Query 36968 TTTCTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTAT 37027
| | | ||| ||||| || || |||||||| || ||||| | | ||| | | |
Sbjct 178924 TGTTAATGATAGTCTTTTGTGAAATTTCCCAAACAGTCTTATACAAATCTTTCAATTCTT 178865
Query 37028 CTGGTAAATCT---AAATGTTGAATAGAACCATTATGTAACACAATTGTATT-CTTTATG 37083
||||| | | ||| |||||| |||||||| ||| | | |||| ||| ||
Sbjct 178864 GTGGTACGTTTGGTAAACCTTGAATGGAACCATTTTGTGTGATTAGA-TATTGCTTCATA 178806
Query 37084 TCATTATTCCACATATTTCTACTTATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGA 37143
||| || ||| ||| | | | || | || || || |||||| || || |||
Sbjct 178805 CCATCATCCCAAATACCCAAATCAACCAAATCACGCAGTAAGTATGGATTGACGACTTGA 178746
Query 37144 AAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCA 37203
|| || ||||||| || | | | || || ||| |||| |||||| | ||||
Sbjct 178745 AATTCACCAGATAGAACACGACGAGAGTACATGTTGGAAGTAACTGGTTCGAAACACTCG 178686
Query 37204 TTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTAT--TAGAAGGCTAT 37261
|| | || ||| || || || || |||||||||||||| ||||| || | ||| |
Sbjct 178685 TTGTAACCTAAAATCTGGGAAGTGGATGCAGTAGGCATAGGTGCCATGGTCAAAGAGT-- 178628
Query 37262 TTCTCAATCCATGTGTATTAATTCTCTTTTTT---AGTTCATTCCAATCCCATAAATCTG 37318
|||| | ||||| | | || || ||| | ||| || ||||||||| | | | |
Sbjct 178627 TTCTAACACCATGCTTCATGATG-TCATTTCTCAAAGT--ATCCCAATCCCACATACC-G 178572
Query 37319 TTGGGTTCTTTAACC-ACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTA 37377
| |||| || || |||| || |||| || ||||||| | |||||||| | |
Sbjct 178571 TAAGGTTTTTCGTCCCACATGTCGAATTGAAGTATACCTTGAGAAGCTGGAGAGCCTTGG 178512
Query 37378 TATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAA 37437
| || || || || || | ||| |||||| || ||| | ||| | | ||||
Sbjct 178511 AAGGTTTCGTATGGGCCATCTCTTTGAGCTAGCTCACAAGAGGCTTCCATGGAAGCATGG 178452
Query 37438 TATATTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAG 37497
|| || ||||| || ||||||||||||| || |||||||||| ||||||| |
Sbjct 178451 TACATGGTTTCAAAGATTTGTATATTTAGTAAGCGTGCTTCTTCGGAGTCGAATGGTAAA 178392
Query 37498 CCCAATAATATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTC 37557
| ||| || || || ||||||||||| || ||||| | | | || || || ||| ||
Sbjct 178391 CGCAACAACATGAAAGTGTCAGCCAAACCTTGGACACCCAAAGCAATCGGCCTGTGTCTC 178332
Query 37558 TTATTAGATCT 37568
||||||||||
Sbjct 178331 ATATTAGATCT 178321
Score = 168 bits (186), Expect = 6e-37
Identities = 414/625 (66%), Gaps = 2/625 (0%)
Strand=Plus/Minus
Query 38010 TTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGT 38069
|| ||| || || | ||| || | ||| || ||||||| || | ||||||||| | |
Sbjct 177864 TTCTTCGACACGCTTCATGAAAAGATCGGGAACCCATAGAGCTGGGAATAAATCTCTCGC 177805
Query 38070 TCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTG 38129
| |||||| || || ||||||||| | | | || ||||| |||||||||||
Sbjct 177804 ACGGATTTCTTCCTTACCGTGATTCTTTCTAATGTCGATGAAGTCGAAGATATCAGCGTG 177745
Query 38130 CCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATA 38189
|||||| || | ||| | | | || || ||||| || | ||| ||||| | || |||
Sbjct 177744 CCATGGCTCCAAATATAGAGCAAAGGCACCAGGTCTCTTGTTACCACCCTGGTCAACATA 177685
Query 38190 TCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTAT 38249
| | ||||| || | | | | |||||| | || || ||||| | ||||| |
Sbjct 177684 ACGGGCAGTGTTGTTGAAGACACGGATCATAGGAATTAACCCGTTAGAAGTCCCGTTCGT 177625
Query 38250 ACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGC 38309
||| | || |||| || | || || || || || | || || ||||| ||
Sbjct 177624 ACCAGCAATGTAAGAGCCGGTTGCACGAATGTTGTGAATATGTAGACCAATACCACCAGC 177565
Query 38310 ATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATC 38369
| ||| || || ||||| |||| || || || || | |||||||| || |||||
Sbjct 177564 AGTTTTGGAAATCAAAGCACATTCCTTCAAAGTGTCGTAGATACCTTCAATGGAATCATC 177505
Query 38370 CTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAA 38429
||| |||| | || ||||| |||||||||||| ||| || || ||||| |||||
Sbjct 177504 CTTCATTGCAACTAGGAAACAGGAGGACATTTGAGGCTTTGGTGTACCAGCGTTGAATAA 177445
Query 38430 TGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATC 38489
|| ||||| || || | || ||||| |||| | ||||| ||||||| | |
Sbjct 177444 AGTTGGAGAGGCGTGAGTAAAGTATTTTAGGGACATCAAGTTATAGGTTTCTAGAGCGGC 177385
Query 38490 ATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTC 38549
|| || | | | ||||||||||||| | || ||||| | | |||||||| | |||
Sbjct 177384 CTCAATGTTATCACCGTGAATACCTAAGGCGACTCTCATGATTAAGTGTTGTGGACGTTC 177325
Query 38550 TATTATTTTATTATTCTGTTTAAGTAGATACGATTTTTCTAATGTTTTTATTCCAAAATA 38609
| || | || | | | || ||||| |||||| ||||| | || || ||
Sbjct 177324 AGCAACTTGACCGTTGACTCTCAATAAGTACGAACGTTCTAAAGTTTTAAAACCGAAGTA 177265
Query 38610 ACTATA-TGAATAATCTCTATCGTA 38633
||| || |||| ||||||| || ||
Sbjct 177264 ACTGTACTGAA-AATCTCTGTCATA 177241
>seq14
Length=143611
Score = 132 bits (146), Expect = 5e-26
Identities = 520/802 (65%), Gaps = 37/802 (5%)
Strand=Plus/Plus
Query 36814 GATGCCGATTTTGTTCTCATATAATACATTCCAGTTTTTAGCCCCAATCTCCATCCGTAA 36873
|| || | || |||||||| || ||||| ||||| ||||| ||| |||| |||||
Sbjct 6661 GAAGCAGCTTGTGTTCTCAAGTAGTACATACCAGTCTTTAGACCCTTCTTCCAACCGTAG 6720
Query 36874 AAATGCATACTGGTCAGTTTTGCGTATGTA---GGATTATCTATATATATTGTCATTGAT 36930
||||||||||| || | |||| | || | ||||| | | | ||| || ||
Sbjct 6721 AAATGCATACTTGTAA-TTTTACCCATTGATGGGGATTGTAGGAAAAGATT--CAAGGAG 6777
Query 36931 TGACTTTGATCTAT--AAACGCACCTCTGTCGGCTGCCATTTCTAAAATACATTTTTGAG 36988
|| |||||| || ||| | | | | | || ||||| | | ||| |||||||
Sbjct 6778 TGGGATTGATCAATGTAAATGGAACGAT--CAGCAGCCATGTTGATAATGGTCTTTTGAG 6835
Query 36989 ATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCTGGTAAATCT---AAATGTT 37045
| || |||||||| |||||||||| | ||| | | | || | | | || | ||
Sbjct 6836 AGATTTCCCAAACAGTTTTATATAGATCTTTCAAGTCTTGAGGAACGTTTGGTAAGTCTT 6895
Query 37046 GAATAGAACCATTATG--TAACACAATTGTATTCTTT-ATGTCATTATTCCACATATTTC 37102
||| |||||||| || ||| ||| ||| ||| || || || ||| ||| |
Sbjct 6896 TAATGGAACCATTTTGAGTAATCAAAT---ATTGTTTCATACTATCATCCCAAATAC--C 6950
Query 37103 TACTT--ATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATAC 37160
| | | | || | | || || |||||| || || || || || |||||||| ||
Sbjct 6951 CAGGTCGACCAAATCACGTAGTAAGTATGGATTGACGACTTGGAATTCACCAGATAAGAC 7010
Query 37161 TCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTAATATTTG 37220
| | | || || || ||| |||||| | | ||||| | | | |||||
Sbjct 7011 ACGACGAGAGTACATGTTTGAAGTGACTGGTTCGAAACATTCATTGTACCCAAGAATTTG 7070
Query 37221 AGATGTAGATGCAGTAGGCATTGGTGCTAT--TAGAAGGCTATTTCTCAATCCATGTGTA 37278
|||||||| || || |||||||| || || | ||| | |||| || |||||| |
Sbjct 7071 GGATGTAGAAGCGGTTGGCATTGGGGCCATGGTTAAAGAGT--TTCTTAACCCATGTTTG 7128
Query 37279 TTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGTT--CTTTAACCACA 37336
||| ||| |||| | ||||||||| | | | ||| || | || |||||
Sbjct 7129 ACAATGTCCTTCTTTAAAGTGTCCCAATCCCACATACCAAATGGCTTAGCATT--CCACA 7186
Query 37337 TATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGT 37396
| || |||||| |||||| ||| || ||||| | | | | || ||| || |
Sbjct 7187 TGTCGAATTGTAAAATACCCTTAGAGGCAGGAGAGCCTTCAAAAGTGGAATATTTACCTT 7246
Query 37397 AAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTT 37456
||| ||||| ||| ||| || ||| || | ||||| || || |||||||||||||
Sbjct 7247 CCTTTTGAGCTAATTCACAAGAAGCTTCAAGGGTGGCATGGTAAATAGTTTCGAAAATTT 7306
Query 37457 GTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAATAATATAAACACAT 37516
| |||| | ||||| |||| ||| | || |||| | | || | ||| | ||
Sbjct 7307 GCTTATTAAGTATTTGAGCTTTTTCACATTCAAATGGTAAACGCAGCATCATATAGGTAT 7366
Query 37517 CAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTAGA---TCTAGACG 37573
| |||||||| ||||| || | | || ||||| ||| || ||||||| ||||| |
Sbjct 7367 CGGCCAAACCTTGAACCCCCAGGGCAATAGGTCTGTGTCTCATATTAGAGTTTCTAGCC- 7425
Query 37574 ATTCTATCACTGGATAATAATT 37595
||| |||||||||||| ||
Sbjct 7426 --TCTGGCACTGGATAATAGTT 7445
Score = 91.5 bits (100), Expect = 1e-13
Identities = 287/445 (64%), Gaps = 0/445 (0%)
Strand=Plus/Plus
Query 38006 CATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTT 38065
|||| | ||| || || | ||| || | |||||| | ||||| |||| || ||||||
Sbjct 7871 CATCCTCTTCGACACGCTTCATGAAAAGATCAGGAATCCATAGGGCAGGGAACAAATCTC 7930
Query 38066 TGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAG 38125
| | | | |||||| || || | | ||||| | | ||| ||||| || || |
Sbjct 7931 TTGCACGAATTTCTTCCTTACCATGAGTTTTTCTGATATCAACAAAGTCGAAGATGTCTG 7990
Query 38126 CGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAA 38185
| |||||||| || | ||| | | || || ||||| || | ||| || || | |
Sbjct 7991 CATGCCATGGCTCCAAGAAAAGGGCAAAGGCACCGGGTCTCTTGTTACCACCTTGGTCCA 8050
Query 38186 TATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGT 38245
|| | | |||||||| ||| | | ||| || | | ||||| || | ||||
Sbjct 8051 CGTAACGTGCAGTGTTATTGAATACACGGATCATGGGAATCAACCCATTTGAAGTACCGT 8110
Query 38246 TTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCAC 38305
| |||| | ||||||| || | | || ||||| | || | || | ||||
Sbjct 8111 TGGTACCTGCAATATAAGAGCCTGTGGAACGAATATTGTTGATATGAAGACCAACACCAC 8170
Query 38306 CTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGT 38365
||||| || || || | || || | ||| || || || | |||||||| || ||
Sbjct 8171 CTGCAGTCTTGGAAATCATGGCACACTCTTTCAAAGTGTCGTAAATACCTTCGATGGAGT 8230
Query 38366 CATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAA 38425
| ||||| || | | | |||||| |||||||||||| ||| || ||||| ||||
Sbjct 8231 CGTCCTTCATGGCAATCAGGAAACAAGAAGACATTTGAGGGTGTGGCGTACCGGCATTAA 8290
Query 38426 ATAATGTAGGAGATGCATGTATGAA 38450
||| || || || || || ||||
Sbjct 8291 ATAGAGTGGGGGAAGCGTGAGTGAA 8315
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468524477889200
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