Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242635.1_202017-08-07]
55 sequences; 11,656,823 total letters
Query= NC_004062.1
Length=119217
Score E
Sequences producing significant alignments: (Bits) Value
seq17 109 4e-19
seq20 104 2e-17
>seq17
Length=83854
Score = 109 bits (120), Expect = 4e-19
Identities = 157/219 (72%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 42892 AGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGT 42951
||||||| ||||| || | || |||||||| | |||||||| |||| || |
Sbjct 56416 AGTCTTAGGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCCGACAGCGTTCTA 56475
Query 42952 TCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCT 43011
| || ||||| ||||| || ||||||||||||| |||||| || | || | ||||||
Sbjct 56476 CCATCTTCCAACTGTTTACCTGCAAAAATCAATCTCTGTTGGTCTGGTGGAATACCTTCC 56535
Query 43012 TTTTCGCTGATC-AACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGT 43070
|| || |||| |||| || || || | | ||||| || ||||| || | ||
Sbjct 56536 TTGTCCTGGATCTTACTC-TTCACATTGTCTATGGTGTCAGAAGATTCGACCTCCAAAGT 56594
Query 43071 TATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
||||| || || ||||||||||| |||||||| |||||
Sbjct 56595 GATAGTCTTACCAGTTAGAGTTTTGACAAAAATCTGCAT 56633
Score = 100 bits (110), Expect = 2e-16
Identities = 139/192 (72%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 42919 TCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAA 42978
|||||||| | || || || |||| || | | || |||| |||||| || ||||||
Sbjct 55987 TCCTTTTGAATGTTATAGTCTGACAGCGTTCTACCATCTTCCAGTTGTTTCCCTGCAAAA 56046
Query 42979 ATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATC-AACTCTTTGACTCT 43037
||||||| |||||| || | || | |||||| || || |||| |||| || || |
Sbjct 56047 ATCAATCTCTGTTGGTCTGGTGGAATACCTTCCTTGTCCTGGATCTTACTC-TTCACATT 56105
Query 43038 GCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCAC 43097
| | | ||||| || ||||| |||| || ||||| || || |||| |||||| ||
Sbjct 56106 GTCTATGGTGTCAGAAGATTCGACCTCTAAAGTGATAGTCTTACCAGTTAAAGTTTTGAC 56165
Query 43098 AAAAATTTGCAT 43109
||||||||||||
Sbjct 56166 AAAAATTTGCAT 56177
>seq20
Length=304555
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|| || | || ||| || ||||| || | |||| ||||||||| | ||||| || |||
Sbjct 8897 CCACCTCTCAATCTCAAGACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 8838
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
|| || | |||| |||||||| || || ||||| ||||||| ||||| || | ||
Sbjct 8837 AAAGTTCTGCCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 8778
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062
| |||||| || || ||| ||||| || ||| ||||| || || ||
Sbjct 8777 ATACCTTCCTTGTCTTGAATCTTAGACTTGACATTGTCAATGGTGTCTGAAGATTCAACT 8718
Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTT 43112
|| | || ||||| || ||||||| ||| || || ||||||||||| ||
Sbjct 8717 TCAAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 8668
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381369344363190
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |