Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242635.1_202017-08-07] 55 sequences; 11,656,823 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq28 143 4e-29 >seq28 Length=374213 Score = 143 bits (158), Expect = 4e-29 Identities = 579/896 (65%), Gaps = 21/896 (2%) Strand=Plus/Plus Query 124996 TGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTT 125055 |||| |||||| ||| || || || ||| || |||||| || |||||||||| | Sbjct 39333 TGTTCCCCATCCAGTACCACGAGATCTGGCAATCGTACAAGCGTGCCGAGGCCTCCTTCT 39392 Query 125056 GGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTG 125115 |||| | ||| || |||| ||||||||||| | |||| ||| | | | ||| | Sbjct 39393 GGACTGCCGAGGAAATCGACTTGTCCAAGGACATCCACGACTGGAACAACAGAATGAACG 39452 Query 125116 AAACTGAGCGAGAGTTTATATCGCACA-TTTTGGCCTTCTTTGCCGGCTCCGATGGAATC 125174 ||| || || || || || || | | | |||||||| |||| |||||| || ||| Sbjct 39453 AAAACGAAAGATTCTTCATCTC-CAGAGTGCTTGCCTTCTTCGCCGCCTCCGACGGTATC 39511 Query 125175 GTCAACGACAA-TCTGTTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTG 125233 |||||||| || | || || | ||||| ||| | || || |||| | | Sbjct 39512 GTCAACGAAAACTTGGTCGAGA-ACTTCTCCACCGAGGTCCAGATCCCGGAGGCCAAGAG 39570 Query 125234 CTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGAT 125293 || ||||| ||||| ||| ||| |||||| | ||||| |||| ||||| |||| Sbjct 39571 TTTCTACGGGTTCCAGATCGCGATCGAGAACATCCACTCCGAAACCTACTCCTTGTTGAT 39630 Query 125294 TGACATGTACATTCGCGATCCGCAACGTAAAC-ACATGCTCTTTAACGCAATCGACACGG 125352 |||| |||| || | || ||| | || | | | | || ||||| |||||||| Sbjct 39631 CGACACCTACA-TCAAGGACCCCAAGGAAAGCGAGTTCTTGTTCAACGCCATCGACACCA 39689 Query 125353 TGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTT 125412 | || || | | ||||| |||||| || | |||||| | |||| | | | Sbjct 39690 TCCCAGAAATCTGCGAGAAGGCCGAATGGGCCCTTAGATGGATCCAGGACGCCGATGCCC 39749 Query 125413 CGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTT 125472 || || || |||||||| || |||||| || | || || ||||||| || || | Sbjct 39750 TGTTCGGTGAAAGACTGGTCGCGTTCGCCTCCATCGAAGGTGTCTTCTTCTCCGGGTCCT 39809 Query 125473 TTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACG 125532 | || ||||||| ||| | ||||| | || | |||||||| |||| | |||| Sbjct 39810 TCGCCTCCATCTTCTGGTTGAAGAAAAGAGGTATGATGCCCGGTTTGACCTTCTCCAACG 39869 Query 125533 AGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACT 125592 | | || | ||||||| || | ||| ||||||||| | | || ||||| | Sbjct 39870 AACTGATCTGCAGAGACGAAGGTTTGCACACCGACTTTGCCTGTTTGTTG-TTCGC--CC 39926 Query 125593 ATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCG 125652 | || | || | || ||||| || ||| || || || ||||| |||| Sbjct 39927 ACTTGAAAAACAAG-CCGGACCCAGCCAT-----CGTCGAGAAAATCGTCACCGAGGCCG 39980 Query 125653 TGAGGATAGAACAAGAGTTTCTAAC-CGAATCCCTACCGGTCAGCATGATTGGCATGAAC 125711 | ||| |||||| || | || | || || | || ||| | || | || |||||| Sbjct 39981 TCGAGATCGAACAA-AGATACTTCCTAGACGCCTTGCCAGTCGCCTTGCTAGGTATGAAC 40039 Query 125712 TGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATT 125771 | | | ||| | | ||| | ||||| || ||||| | || || || || | Sbjct 40040 GCCGACTTGATGAACCAATACGTCGAGTTCGTCGCAGACAGACTCTTGGTCGCCTTCGGT 40099 Query 125772 GGCCGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAG 125831 | ||| ||||| | | | || ||||| ||||||||| | ||| || | | Sbjct 40100 AACAAGAAGTACTACAAGGTCGACAACCCCTTCGATTTCATGGAAAACATTTCCTTGGCC 40159 Query 125832 GGTAAGACCAACTTTTTCGAGAAGAAGGTCAGCGAGTAC--AAACGCTACGGTGTC 125885 |||||||||||||| ||||| |||| ||| ||| ||| ||| || ||||||| Sbjct 40160 GGTAAGACCAACTTCTTCGAAAAGAGAGTCTCCGACTACCAAAAGGC--CGGTGTC 40213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058690521800