Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242635.1_202017-08-07]
55 sequences; 11,656,823 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq28 143 4e-29
>seq28
Length=374213
Score = 143 bits (158), Expect = 4e-29
Identities = 579/896 (65%), Gaps = 21/896 (2%)
Strand=Plus/Plus
Query 124996 TGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTT 125055
|||| |||||| ||| || || || ||| || |||||| || |||||||||| |
Sbjct 39333 TGTTCCCCATCCAGTACCACGAGATCTGGCAATCGTACAAGCGTGCCGAGGCCTCCTTCT 39392
Query 125056 GGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTG 125115
|||| | ||| || |||| ||||||||||| | |||| ||| | | | ||| |
Sbjct 39393 GGACTGCCGAGGAAATCGACTTGTCCAAGGACATCCACGACTGGAACAACAGAATGAACG 39452
Query 125116 AAACTGAGCGAGAGTTTATATCGCACA-TTTTGGCCTTCTTTGCCGGCTCCGATGGAATC 125174
||| || || || || || || | | | |||||||| |||| |||||| || |||
Sbjct 39453 AAAACGAAAGATTCTTCATCTC-CAGAGTGCTTGCCTTCTTCGCCGCCTCCGACGGTATC 39511
Query 125175 GTCAACGACAA-TCTGTTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTG 125233
|||||||| || | || || | ||||| ||| | || || |||| | |
Sbjct 39512 GTCAACGAAAACTTGGTCGAGA-ACTTCTCCACCGAGGTCCAGATCCCGGAGGCCAAGAG 39570
Query 125234 CTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGAT 125293
|| ||||| ||||| ||| ||| |||||| | ||||| |||| ||||| ||||
Sbjct 39571 TTTCTACGGGTTCCAGATCGCGATCGAGAACATCCACTCCGAAACCTACTCCTTGTTGAT 39630
Query 125294 TGACATGTACATTCGCGATCCGCAACGTAAAC-ACATGCTCTTTAACGCAATCGACACGG 125352
|||| |||| || | || ||| | || | | | | || ||||| ||||||||
Sbjct 39631 CGACACCTACA-TCAAGGACCCCAAGGAAAGCGAGTTCTTGTTCAACGCCATCGACACCA 39689
Query 125353 TGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTT 125412
| || || | | ||||| |||||| || | |||||| | |||| | | |
Sbjct 39690 TCCCAGAAATCTGCGAGAAGGCCGAATGGGCCCTTAGATGGATCCAGGACGCCGATGCCC 39749
Query 125413 CGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTT 125472
|| || || |||||||| || |||||| || | || || ||||||| || || |
Sbjct 39750 TGTTCGGTGAAAGACTGGTCGCGTTCGCCTCCATCGAAGGTGTCTTCTTCTCCGGGTCCT 39809
Query 125473 TTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACG 125532
| || ||||||| ||| | ||||| | || | |||||||| |||| | ||||
Sbjct 39810 TCGCCTCCATCTTCTGGTTGAAGAAAAGAGGTATGATGCCCGGTTTGACCTTCTCCAACG 39869
Query 125533 AGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACT 125592
| | || | ||||||| || | ||| ||||||||| | | || ||||| |
Sbjct 39870 AACTGATCTGCAGAGACGAAGGTTTGCACACCGACTTTGCCTGTTTGTTG-TTCGC--CC 39926
Query 125593 ATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCG 125652
| || | || | || ||||| || ||| || || || ||||| ||||
Sbjct 39927 ACTTGAAAAACAAG-CCGGACCCAGCCAT-----CGTCGAGAAAATCGTCACCGAGGCCG 39980
Query 125653 TGAGGATAGAACAAGAGTTTCTAAC-CGAATCCCTACCGGTCAGCATGATTGGCATGAAC 125711
| ||| |||||| || | || | || || | || ||| | || | || ||||||
Sbjct 39981 TCGAGATCGAACAA-AGATACTTCCTAGACGCCTTGCCAGTCGCCTTGCTAGGTATGAAC 40039
Query 125712 TGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATT 125771
| | | ||| | | ||| | ||||| || ||||| | || || || || |
Sbjct 40040 GCCGACTTGATGAACCAATACGTCGAGTTCGTCGCAGACAGACTCTTGGTCGCCTTCGGT 40099
Query 125772 GGCCGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAG 125831
| ||| ||||| | | | || ||||| ||||||||| | ||| || | |
Sbjct 40100 AACAAGAAGTACTACAAGGTCGACAACCCCTTCGATTTCATGGAAAACATTTCCTTGGCC 40159
Query 125832 GGTAAGACCAACTTTTTCGAGAAGAAGGTCAGCGAGTAC--AAACGCTACGGTGTC 125885
|||||||||||||| ||||| |||| ||| ||| ||| ||| || |||||||
Sbjct 40160 GGTAAGACCAACTTCTTCGAAAAGAGAGTCTCCGACTACCAAAAGGC--CGGTGTC 40213
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741058690521800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |