Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242635.1_202017-08-07]
55 sequences; 11,656,823 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq17 105 6e-18
>seq17
Length=83854
Score = 105 bits (116), Expect = 6e-18
Identities = 153/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 48511 CCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTC 48570
||||| || || ||||| ||| ||| ||||||||||||||||| | | || |
Sbjct 56190 CCTTAGGACCAAGTGAAGAGTGGACTCTTTTTGAATGTTGTAATCCGATAGCGTTCTACC 56249
Query 48571 GTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTT 48630
||| ||||| || ||||| || |||| || | ||| || ||| || | || ||||||
Sbjct 56250 GTCTTCCAGTTGTTTACCAGCGAAAATCAACCTCTGTTGGTCCGGAGGAATACCTTCCTT 56309
Query 48631 GTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTAT 48690
|||| || || ||||| | ||||| || | | | || ||| | |||||
Sbjct 56310 GTCCTGGATCTTAGACTTGACGTTATCGATGGTGTCAGAATATTCAACCTCCAAGGTTAT 56369
Query 48691 GGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
||| |||||||| |||||||| ||||||||||||||
Sbjct 56370 GGTCTTACCGGTCAGAGTTTTGACAAAAATCTGCAT 56405
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/225 (70%), Gaps = 4/225 (2%)
Strand=Plus/Plus
Query 48511 CCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTC 48570
||||| || || ||||| ||| |||||||||||||||||||| | || || |
Sbjct 56646 CCTTAGGACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCCGACAGCGTTCTACC 56705
Query 48571 GTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTT 48630
||| ||||| || ||||| || |||| || | ||| || ||| || | | ||||||
Sbjct 56706 GTCTTCCAGTTGTTTACCAGCGAAAATCAACCTCTGTTGGTCCGGAGGAATGCCTTCCTT 56765
Query 48631 GTCCATAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTT 48688
|||| ||||| ||||| | | || || ||||| | ||| || ||| | ||
Sbjct 56766 GTCCTGGATTTTGGACTTGACGTTGTCG--ATAGTATCAGAAGATTCGACCTCCAAAGTA 56823
Query 48689 ATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATCGTGTCT 48733
|| || ||||| || || || || || ||||| ||||| ||||||
Sbjct 56824 ATAGTCTTACCAGTCAGTGTCTTGACGAAAATTTGCATAGTGTCT 56868
Score = 86.0 bits (94), Expect = 5e-12
Identities = 148/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 48512 CTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCG 48571
|||| || || ||||| || |||||||||||||||||||| | || || |
Sbjct 56419 CTTAGGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCCGACAGCGTTCTACCA 56478
Query 48572 TCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTG 48631
|| |||| ||| ||||| | |||| || | ||| || || || | || |||||||
Sbjct 56479 TCTTCCAACTGTTTACCTGCAAAAATCAATCTCTGTTGGTCTGGTGGAATACCTTCCTTG 56538
Query 48632 TCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATG 48691
||| || || ||| | | ||||||| || | ||| || ||| | || ||
Sbjct 56539 TCCTGGATCTTACTCTTCACATTGTCTATGGTGTCAGAAGATTCGACCTCCAAAGTGATA 56598
Query 48692 GTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|| ||||| || |||||||| ||||||||||||||
Sbjct 56599 GTCTTACCAGTTAGAGTTTTGACAAAAATCTGCAT 56633
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421250917630055
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |