Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242635.1_202017-08-07] 55 sequences; 11,656,823 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq13 127 2e-24 seq17 118 1e-21 seq20 113 4e-20 seq26 107 2e-18 >seq13 Length=154029 Score = 127 bits (140), Expect = 2e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || |||||||||| ||| || || || ||||| ||||||||||| | ||| || || | Sbjct 46849 CCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAC 46790 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | || | || |||| || || || |||||||||||||||| || || ||||| Sbjct 46789 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAGGG 46730 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 |||||||| ||||| | ||| |||| |||||| | | | |||||||| || || Sbjct 46729 ATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 46670 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAA 94998 || | |||||||| || ||||| | |||||| ||||| Sbjct 46669 TCCAAAGTGATGGTCTTACCAGTCAAAGTTTTGACAAA 46632 >seq17 Length=83854 Score = 118 bits (130), Expect = 1e-21 Identities = 170/240 (71%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| | | || || ||||| | || | |||||||| | |||||||||||||| | Sbjct 56394 AAAAATCTGCATACCACCTCTTAGTCTTAGGACCAAGTGAAGGGTAGATTCCTTTTGAAT 56453 Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887 ||| ||||| || || | ||| |||| |||||| || |||| || ||||| || Sbjct 56454 GTTGTAATCCGACAGCGTTCTACCATCTTCCAACTGTTTACCTGCAAAAATCAATCTCTG 56513 Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947 || ||||| ||||||||||| ||||| | || || ||| || | | | ||||| Sbjct 56514 TTGGTCTGGTGGAATACCTTCCTTGTCCTGGATCTTACTCTTCACATTGTCTATGGTGTC 56573 Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || ||||| || | ||||| || || ||||| |||||||| ||||| |||||||| Sbjct 56574 AGAAGATTCGACCTCCAAAGTGATAGTCTTACCAGTTAGAGTTTTGACAAAAATCTGCAT 56633 Score = 114 bits (126), Expect = 1e-20 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||| | || || |||||||| | |||||||||||||| | |||||| | || Sbjct 55951 CCACCTCTTAGTCTCAGGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTATAGT--CTG 56008 Query 94841 ATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 | || ||| | ||| ||||| ||||| || |||| || ||||| || || ||||| | Sbjct 56009 ACAGCGTTCTACCATCTTCCAGTTGTTTCCCTGCAAAAATCAATCTCTGTTGGTCTGGTG 56068 Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958 |||||||||| ||||| | || || ||| || | | | ||||||| |||| Sbjct 56069 GAATACCTTCCTTGTCCTGGATCTTACTCTTCACATTGTCTATGGTGTCAGAAGATTCGA 56128 Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || | ||||| || || ||||| | |||||| ||||| || ||||| Sbjct 56129 CCTCTAAAGTGATAGTCTTACCAGTTAAAGTTTTGACAAAAATTTGCAT 56177 Score = 107 bits (118), Expect = 2e-18 Identities = 170/242 (70%), Gaps = 4/242 (2%) Strand=Plus/Plus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| ||| || || ||||| | | | |||||||| | ||| || || ||||| | Sbjct 56166 AAAAATTTGCATACCACCTCTTAGCCTTAGGACCAAGTGAAGAGTGGACTCTTTTTGAAT 56225 Query 94828 GTTATAATCGCTCATAGTGTTGGAA--TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTT 94885 ||| ||||| |||| ||| | || ||||| ||||| || | || || || || Sbjct 56226 GTTGTAATCCG--ATAGCGTTCTACCGTCTTCCAGTTGTTTACCAGCGAAAATCAACCTC 56283 Query 94886 TGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTG 94945 || || || |||||||||||||| ||||| | || || | ||||||| ||| ||| Sbjct 56284 TGTTGGTCCGGAGGAATACCTTCCTTGTCCTGGATCTTAGACTTGACGTTATCGATGGTG 56343 Query 94946 TCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGC 95005 |||| | || || || | || ||||| || || || |||||||| ||||| |||||| Sbjct 56344 TCAGAATATTCAACCTCCAAGGTTATGGTCTTACCGGTCAGAGTTTTGACAAAAATCTGC 56403 Query 95006 AT 95007 || Sbjct 56404 AT 56405 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||| | ||| ||||||||||| | ||| ||||| || || | || ||| Sbjct 56653 ACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCCGACAGCGTTCTACCGTCTTCC 56712 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 || ||||| || | || || || || || || || |||||||| ||||| ||||| | Sbjct 56713 AGTTGTTTACCAGCGAAAATCAACCTCTGTTGGTCCGGAGGAATGCCTTCCTTGTCCTGG 56772 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 ||||| | ||||||| | ||| ||| |||| ||||| || | || || || || Sbjct 56773 ATTTTGGACTTGACGTTGTCGATAGTATCAGAAGATTCGACCTCCAAAGTAATAGTCTTA 56832 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| || || || || || || ||||| Sbjct 56833 CCAGTCAGTGTCTTGACGAAAATTTGCAT 56861 >seq20 Length=304555 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || |||||||||| ||| |||||||| ||||| || |||||||| | ||| || || | Sbjct 8897 CCACCTCTCAATCTCAAGACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 8838 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| || || |||| || || || ||||||| |||||||| || || || ||| Sbjct 8837 AAAGTTCTGCCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 8778 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 |||||||| ||||| | ||| || | |||||| | | | ||||| | || || Sbjct 8777 ATACCTTCCTTGTCTTGAATCTTAGACTTGACATTGTCAATGGTGTCTGAAGATTCAACT 8718 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| || || || || || || | ||| || || || || ||||| Sbjct 8717 TCAAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 8671 >seq26 Length=194426 Score = 107 bits (118), Expect = 2e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || |||||||||| ||| || || || ||||| ||||||||||| | ||| || ||| | Sbjct 158875 CCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGAC 158934 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | || | || |||| || || || ||||||| |||||||| || || || || Sbjct 158935 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 158994 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 |||||||||||||| | ||| || | ||||| | | | ||||||| || || Sbjct 158995 ATACCTTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCAGAAGATTCAACT 159054 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAG 94999 || | |||||||| || ||||| | ||| || || ||| Sbjct 159055 TCTAGAGTGATGGTCTTACCAGTCAAAGTCTTAACGAAG 159093 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448290891799800