Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242635.1_202017-08-07] 55 sequences; 11,656,823 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq23 125 1e-24 seq37 120 5e-23 >seq23 Length=921690 Score = 125 bits (138), Expect = 1e-24 Identities = 192/271 (71%), Gaps = 2/271 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||| | | ||| ||| |||||||||||||||| ||||| ||||||||||| Sbjct 233741 GCTAAGCGTCACAGAAAGAT-TCTAAGAGATAACATCCAAGGTATCACTAAGCCAGCTAT 233683 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | ||||| | | ||||| ||||||||| |||| || || |||| ||||| | Sbjct 233682 CAGAAGATTGGCTAGAAGAGGTGGTGTCAAGCGTATCTCCGGTTTAATCTACGAAGAAGT 233623 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | ||| |||||| |||| | | | || ||| || || || || || || Sbjct 233622 CAGAGCTGTCTTGAAGTCCTTCTTGGAATCTGTCATCAGAGACTCTGTCACTTACACTGA 233563 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||||||| | |||||||| || || | ||| | || || || ||||| | ||||| Sbjct 233562 GCACGCTAAGAGAAAGACTGTTACTTCTCTAGATGTTGTTTACGCTTTGAAGAGACAAGG 233503 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCT 16702 | | | || ||||| || |||||||| Sbjct 233502 TAGAACCTTATACGGTTTCGGTGGTTAATCT 233472 >seq37 Length=34095 Score = 120 bits (132), Expect = 5e-23 Identities = 189/268 (71%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||| | |||| ||| |||||||||||||||| ||||| ||||||||||| Sbjct 2943 GCTAAGCGTCACAGAAAGAT-TCTAAGAGATAACATCCAAGGTATCACTAAGCCAGCTAT 3001 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | ||||| | | ||||| ||||||||| |||| || || |||| ||||| | Sbjct 3002 CAGAAGATTGGCTAGAAGAGGTGGTGTCAAGCGTATCTCCGGTTTAATCTACGAAGAAGT 3061 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | ||| |||||| |||| | | | || ||| || || || || || || Sbjct 3062 CAGAGCTGTCTTGAAGTCCTTCTTGGAATCTGTCATCAGAGACTCTGTCACTTACACTGA 3121 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||||||| | |||||||| || || | ||| | || || || ||||| | ||||| Sbjct 3122 GCACGCTAAGAGAAAGACTGTTACTTCTCTAGATGTTGTTTACGCTTTGAAGAGACAAGG 3181 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | | | || ||||| || ||||| Sbjct 3182 TAGAACCTTATACGGTTTCGGTGGTTAA 3209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075149713115