Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242635.1_202017-08-07]
55 sequences; 11,656,823 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq23 125 1e-24
seq37 120 5e-23
>seq23
Length=921690
Score = 125 bits (138), Expect = 1e-24
Identities = 192/271 (71%), Gaps = 2/271 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||||||||||| | | ||| ||| |||||||||||||||| ||||| |||||||||||
Sbjct 233741 GCTAAGCGTCACAGAAAGAT-TCTAAGAGATAACATCCAAGGTATCACTAAGCCAGCTAT 233683
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | | ||||| | | ||||| ||||||||| |||| || || |||| ||||| |
Sbjct 233682 CAGAAGATTGGCTAGAAGAGGTGGTGTCAAGCGTATCTCCGGTTTAATCTACGAAGAAGT 233623
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
| | ||| |||||| |||| | | | || ||| || || || || || ||
Sbjct 233622 CAGAGCTGTCTTGAAGTCCTTCTTGGAATCTGTCATCAGAGACTCTGTCACTTACACTGA 233563
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||||||| | |||||||| || || | ||| | || || || ||||| | |||||
Sbjct 233562 GCACGCTAAGAGAAAGACTGTTACTTCTCTAGATGTTGTTTACGCTTTGAAGAGACAAGG 233503
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCT 16702
| | | || ||||| || ||||||||
Sbjct 233502 TAGAACCTTATACGGTTTCGGTGGTTAATCT 233472
>seq37
Length=34095
Score = 120 bits (132), Expect = 5e-23
Identities = 189/268 (71%), Gaps = 2/268 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||||||||||| | |||| ||| |||||||||||||||| ||||| |||||||||||
Sbjct 2943 GCTAAGCGTCACAGAAAGAT-TCTAAGAGATAACATCCAAGGTATCACTAAGCCAGCTAT 3001
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | | ||||| | | ||||| ||||||||| |||| || || |||| ||||| |
Sbjct 3002 CAGAAGATTGGCTAGAAGAGGTGGTGTCAAGCGTATCTCCGGTTTAATCTACGAAGAAGT 3061
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
| | ||| |||||| |||| | | | || ||| || || || || || ||
Sbjct 3062 CAGAGCTGTCTTGAAGTCCTTCTTGGAATCTGTCATCAGAGACTCTGTCACTTACACTGA 3121
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||||||| | |||||||| || || | ||| | || || || ||||| | |||||
Sbjct 3122 GCACGCTAAGAGAAAGACTGTTACTTCTCTAGATGTTGTTTACGCTTTGAAGAGACAAGG 3181
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
| | | || ||||| || |||||
Sbjct 3182 TAGAACCTTATACGGTTTCGGTGGTTAA 3209
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075149713115
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |