Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242635.1_202017-08-07]
55 sequences; 11,656,823 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq17 134 1e-26
seq26 114 1e-20
seq28 89.7 5e-13
>seq17
Length=83854
Score = 134 bits (148), Expect = 1e-26
Identities = 170/232 (73%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | ||||| ||||| |||||||| || | ||||| | || | |||||
Sbjct 56177 ATGCAAATTTTTGTCAAAACTTTAACTGGTAAGACTATCACTTTAGAGGTCGAATCTTCT 56118
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|||||||| || | || || ||||| ||||| ||||| || || || || |||
Sbjct 56117 GACACCATAGACAATGTGAAGAGTAAGATCCAGGACAAGGAAGGTATTCCACCAGACCAA 56058
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAAC--GTCAGCGACTATA 26946
|| ||| | |||| | || |||||||| ||||||| ||||| ||||| ||||||
Sbjct 56057 CAGAGATTGATTTTTGCAGGGAAACAACTGGAAGATGGTAGAACGCTGTCAG--ACTATA 56000
Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAAA 26998
|||||||||| |||||||| | || ||||||||||||| ||||| || ||
Sbjct 55999 ACATTCAAAAGGAATCTACCCTTCACTTGGTCCTGAGACTAAGAGGTGGCAA 55948
Score = 102 bits (112), Expect = 8e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | ||||| ||||| | || || || | || ||| | || | ||||
Sbjct 56405 ATGCAGATTTTTGTCAAAACTCTGACCGGTAAGACCATAACCTTGGAGGTTGAATATTCT 56346
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||||||||| | ||||| ||||| ||||| ||||| || ||||| || |||
Sbjct 56345 GACACCATCGATAACGTCAAGTCTAAGATCCAGGACAAGGAAGGTATTCCTCCGGACCAA 56286
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCG-ACTATAA 26947
|| || | |||| || || |||||||| ||||| | ||||| || | || | || ||
Sbjct 56285 CAGAGGTTGATTTTCGCTGGTAAACAACTGGAAGACGGTAGAA-CGCTATCGGATTACAA 56227
Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
|||||||||||| || ||| | || ||||||| || || ||||| ||
Sbjct 56226 CATTCAAAAAGAGTCCACTCTTCACTTGGTCCTAAGGCTAAGAGGTGG 56179
Score = 98.7 bits (108), Expect = 1e-15
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | ||||| ||||| ||||||| || | ||||| | || | |||||
Sbjct 56633 ATGCAGATTTTTGTCAAAACTCTAACTGGTAAGACTATCACTTTGGAGGTCGAATCTTCT 56574
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|||||||| || | || || ||||| ||||| ||||| || || || || |||
Sbjct 56573 GACACCATAGACAATGTGAAGAGTAAGATCCAGGACAAGGAAGGTATTCCACCAGACCAA 56514
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| ||| | |||| | || ||||| | ||||||| ||||| | || || |||
Sbjct 56513 CAGAGATTGATTTTTGCAGGTAAACAGTTGGAAGATGGTAGAACGCTGTCGGATTACAAC 56454
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
|||||||| |||||||| | || ||||||| ||||| ||||| ||
Sbjct 56453 ATTCAAAAGGAATCTACCCTTCACTTGGTCCTAAGACTAAGAGGTGG 56407
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | || || || ||| | ||||| || | || || | || | |||||
Sbjct 56861 ATGCAAATTTTCGTCAAGACACTGACTGGTAAGACTATTACTTTGGAGGTCGAATCTTCT 56802
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|| || ||||| | ||||| || || ||||| ||||| || ||||| || |||
Sbjct 56801 GATACTATCGACAACGTCAAGTCCAAAATCCAGGACAAGGAAGGCATTCCTCCGGACCAA 56742
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| || | |||| || || |||||||| ||||| | ||||| | || || |||
Sbjct 56741 CAGAGGTTGATTTTCGCTGGTAAACAACTGGAAGACGGTAGAACGCTGTCGGATTACAAC 56682
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
|||||||| ||||| ||| | || ||||||| || || ||||| ||
Sbjct 56681 ATTCAAAAGGAATCCACTCTTCACTTGGTCCTAAGGCTAAGAGGTGG 56635
>seq26
Length=194426
Score = 114 bits (126), Expect = 1e-20
Identities = 156/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 26778 TTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATC 26837
|| || || || || ||||| || | ||||| | ||| | ||||| ||||||||
Sbjct 159092 TTCGTTAAGACTTTGACTGGTAAGACCATCACTCTAGAAGTTGAATCTTCTGACACCATT 159033
Query 26838 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTC 26897
|| | |||||| |||||| ||||||||||| || || || || ||||||||| |
Sbjct 159032 GACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATTG 158973
Query 26898 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAA 26957
|| | | || || ||| | ||||| | ||||| | | |||||| |||||||||||
Sbjct 158972 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAACATTCAAAAG 158913
Query 26958 GAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
||||| ||| | ||| | ||| ||||| | ||||| ||
Sbjct 158912 GAATCCACTTTACATTTAGTCTTGAGATTGAGAGGTGG 158875
>seq28
Length=374213
Score = 89.7 bits (98), Expect = 5e-13
Identities = 369/572 (65%), Gaps = 24/572 (4%)
Strand=Plus/Minus
Query 119939 ACAAGCAAAGTCGGTGTGTAGTCCTTCGTCTCTGGAAATGAGTTCGTTGCTGTAAGTCAA 119998
||| |||||||||||||| | |||||||||||| | || ||||||||| | | |||||
Sbjct 39913 ACAGGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAGTTCGTTGGAGAAGGTCAA 39854
Query 119999 GCCGGGTAGAGCTCCTTTTTTCGAGTCTTTGATATAGTAGATTGCAGCAAAACTACCAGa 120058
||||| | ||| ||||| || | || |||| | || || || ||
Sbjct 39853 ACCGGGCATCATACCTCTTTTC------TTCAACCAGAAGATGGAGGCGAAGGACCCGGA 39800
Query 120059 aaaaaaGACGCCTTCGACGATAGCAAAAGCGACCATGCGTTCGGCGAATGTGGCAGATTG 120118
|| ||||| ||||||| | || || ||||||| | ||| |||| ||||
Sbjct 39799 GAAGAAGACACCTTCGATGGAGGCGAACGCGACCAGTCTTTCACCGAACAGGGCATCGGC 39740
Query 120119 ATTTTCGATCCATTTTTGAGCCCAAGCCGCCTTCTGCTTGACACTATCTAT-ATGCT--C 120175
| | ||||||| | | ||||| | ||||||| || | ||| ||| | |
Sbjct 39739 GTCCTGGATCCATCTAAGGGCCCATTCGGCCTTCTCGCAGA---TTTCTGGGATGGTGTC 39683
Query 120176 GATCGCATTCAAAATCCTGTCGCATTCTTGGGGATCTTTAATGTATTCGACGA-CAAGAA 120234
||| || || || | |||| ||| | ||| || || ||||| | ||| ||| ||
Sbjct 39682 GATGGCGTTGAACAAGAACTCGCTTTCCTTGGGGTCCTTGATGTAGGTGTCGATCAACAA 39623
Query 120235 TGTTATACATTTCCGTGTGAACACACTCAATGAATGTCTGTTGCGCATAGAAAAAACTAG 120294
| || |||| | ||| | ||| || |||| | | |||||| | |
Sbjct 39622 GGAG-TAGGTTTCGGAGTGGATGTTCTCGATCGCGATCTGGAACCCGTAGAAACTCTTGG 39564
Query 120295 CTTCCAAT-TCGGG--CACGGCGGATTGCATGTGCTCGATGATGTTAGTGTTCACGATGA 120351
| ||| || || | ||| ||| | || ||||| | ||| ||| |||||
Sbjct 39563 CCTCCGGGATCTGGACCTCGGTGGAG---AAGTTCTCGACCAAGTTTTCGTTGACGATAC 39507
Query 120352 CGTCGGCGGCAGCGAAAAACGCGAGAACGTGCTTAAGA--AAAAATCGTTCTTTATCGTT 120409
|||||| ||| ||||| || || || || || ||| || |||| ||| || |||||
Sbjct 39506 CGTCGGAGGCGGCGAAGAAGGCAAGCACT--CTGGAGATGAAGAATCTTTCGTTTTCGTT 39449
Query 120410 CAGTTTTTTGTTCCAATCGTCAAAGTCCTTGGACATGTCGATCTCTTCGACTTTCCAGTG 120469
|| | | |||||||| |||| | ||||||||||| |||||| || ||| | |||||
Sbjct 39448 CATTCTGTTGTTCCAGTCGTGGATGTCCTTGGACAAGTCGATTTCCTCGGCAGTCCAGAA 39389
Query 120470 ACAATCGACCGCTTTCTTGTACGATTGCCAGA 120501
| | | || |||||||||||||||||
Sbjct 39388 GGAGGCCTCGGCACGCTTGTACGATTGCCAGA 39357
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478662070919600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |