Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242635.1_202017-08-07]
55 sequences; 11,656,823 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq17 111 1e-19
seq26 109 5e-19
seq28 107 2e-18
seq13 100 2e-16
seq20 96.9 3e-15
>seq17
Length=83854
Score = 111 bits (122), Expect = 1e-19
Identities = 163/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | ||||| ||||| |||||||| || | || || | || ||||| |
Sbjct 56177 ATGCAAATTTTTGTCAAAACTTTAACTGGTAAGACTATCACTTTAGAGGTCGAATCTTCT 56118
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|||||||| || | || || ||||| ||||| ||||| || || || || |||
Sbjct 56117 GACACCATAGACAATGTGAAGAGTAAGATCCAGGACAAGGAAGGTATTCCACCAGACCAA 56058
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAAC--GTCAGCGATTATA 24168
|||||| |||||| | || || ||||| ||||||| |||| ||||| | ||||
Sbjct 56057 CAGAGATTGATTTTTGCAGGGAAACAACTGGAAGATGGTAGAACGCTGTCAG--ACTATA 56000
Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|||||||||| |||||||| |||| || || | ||| | ||||| ||
Sbjct 55999 ACATTCAAAAGGAATCTACCCTTCACTTGGTCCTGAGACTAAGAGGTGG 55951
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | ||||| ||||| ||||||| || | || || | || ||||| |
Sbjct 56633 ATGCAGATTTTTGTCAAAACTCTAACTGGTAAGACTATCACTTTGGAGGTCGAATCTTCT 56574
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|||||||| || | || || ||||| ||||| ||||| || || || || |||
Sbjct 56573 GACACCATAGACAATGTGAAGAGTAAGATCCAGGACAAGGAAGGTATTCCACCAGACCAA 56514
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
|||||| |||||| | || || || | ||||||| |||| | ||||| |||
Sbjct 56513 CAGAGATTGATTTTTGCAGGTAAACAGTTGGAAGATGGTAGAACGCTGTCGGATTACAAC 56454
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|||||||| |||||||| |||| || || ||||| | ||||| ||
Sbjct 56453 ATTCAAAAGGAATCTACCCTTCACTTGGTCCTAAGACTAAGAGGTGG 56407
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | || || || ||| | ||||| || | ||||| | || ||||| |
Sbjct 56861 ATGCAAATTTTCGTCAAGACACTGACTGGTAAGACTATTACTTTGGAGGTCGAATCTTCT 56802
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|| || ||||| | ||||| || || ||||| |||||||| ||||| || |||
Sbjct 56801 GATACTATCGACAACGTCAAGTCCAAAATCCAGGACAAGGAAGGCATTCCTCCGGACCAA 56742
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||||| |||||| || || || ||||| ||||| | |||| | ||||| |||
Sbjct 56741 CAGAGGTTGATTTTCGCTGGTAAACAACTGGAAGACGGTAGAACGCTGTCGGATTACAAC 56682
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|||||||| ||||| || |||| || || |||| | ||||| ||
Sbjct 56681 ATTCAAAAGGAATCCACTCTTCACTTGGTCCTAAGGCTAAGAGGTGG 56635
Score = 93.3 bits (102), Expect = 4e-14
Identities = 123/168 (73%), Gaps = 2/168 (1%)
Strand=Plus/Minus
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||||||||| | ||||| ||||| ||||| ||||| || ||||| || |||
Sbjct 56345 GACACCATCGATAACGTCAAGTCTAAGATCCAGGACAAGGAAGGTATTCCTCCGGACCAA 56286
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCG-ATTATAA 24169
||||| |||||| || || || ||||| ||||| | |||| || | || |||| ||
Sbjct 56285 CAGAGGTTGATTTTCGCTGGTAAACAACTGGAAGACGGTAGAA-CGCTATCGGATTACAA 56227
Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|||||||||||| || || |||| || || |||| | ||||| ||
Sbjct 56226 CATTCAAAAAGAGTCCACTCTTCACTTGGTCCTAAGGCTAAGAGGTGG 56179
>seq26
Length=194426
Score = 109 bits (120), Expect = 5e-19
Identities = 155/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 24000 TTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATC 24059
|| || || || || ||||| || | || || | ||||| || | ||||||||
Sbjct 159092 TTCGTTAAGACTTTGACTGGTAAGACCATCACTCTAGAAGTTGAATCTTCTGACACCATT 159033
Query 24060 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTG 24119
|| | |||||| |||||| ||||||||||| || || || || ||||| ||| ||
Sbjct 159032 GACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATTG 158973
Query 24120 ATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAA 24179
|| | | || |||||| | ||||| | |||| | | ||| || |||||||||||
Sbjct 158972 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAACATTCAAAAG 158913
Query 24180 GAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
||||| || | |||||||| || ||||||||||| ||
Sbjct 158912 GAATCCACTTTACATTTAGTCTTGAGATTGAGAGGTGG 158875
>seq28
Length=374213
Score = 107 bits (118), Expect = 2e-18
Identities = 349/532 (66%), Gaps = 34/532 (6%)
Strand=Plus/Minus
Query 104887 CAGGCAAAGTCTGTGTGCAATCCTTCATCTCTAGAAATAAGTTCGTTGCTGTAAGTCAAG 104946
||||||||||| |||||||| ||||| ||||| | || ||||||||| | | |||||
Sbjct 39912 CAGGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAGTTCGTTGGAGAAGGTCAAA 39853
Query 104947 CCAGGTAGAGCCCCtttttttGTGTCTTTAATATAGTAGATGGCAGCAAAACTACCGGAG 105006
|| || | ||| ||| |||| || || |||||| || || ||||||
Sbjct 39852 CCGGGCATCATACCTCTTT-----TCTTCAA-CCAGAAGATGGAGGCGAAGGACCCGGAG 39799
Query 105007 AAAAAGACACCTTCGACGATGGCAAACGCGACCATGCGTTCGGCGAATGTAGCAGTTTGA 105066
|| ||||||||||||| | ||| |||||||||| | ||| |||| ||| | |
Sbjct 39798 AAGAAGACACCTTCGATGGAGGCGAACGCGACCAGTCTTTCACCGAACAGGGCA--TCGG 39741
Query 105067 CTT--TCAATCCATTTCTGAGCCCATGTTGCCTTCCGTTTGACGCTATC---AATGTGCT 105121
| | | |||||| | | |||||| |||||| | | | | || ||| |
Sbjct 39740 CGTCCTGGATCCATCTAAGGGCCCATTCGGCCTTC---TCGCAGATTTCTGGGATGGTGT 39684
Query 105122 CGATGGCATTCAAAATCCTGTCGCATTCCTGAGGATCTTTAATGTA---TTCGA-CCACA 105177
||||||| || || | |||| ||||| || || || ||||| |||| | |||
Sbjct 39683 CGATGGCGTTGAACAAGAACTCGCTTTCCTTGGGGTCCTTGATGTAGGTGTCGATCAACA 39624
Query 105178 AGAATGTTGTACATTTCCGTGTGAACGCACTCGATAGATGTCTGTTGCGCATAGAAAAAA 105237
|| | ||| |||| | ||| | | |||||| | |||| | | ||||||
Sbjct 39623 AGGA----GTAGGTTTCGGAGTGGATGTTCTCGATCGCGATCTGGAACCCGTAGAAACTC 39568
Query 105238 GACGCCTCC---ATTTCGGGCACGGCCGACTGCATGTGCTCGATGATATTAGTGTTCACG 105294
|||||| || | | | ||| || | || ||||| | || ||| |||
Sbjct 39567 TTGGCCTCCGGGATCTGGACCTCGGTGGA---GAAGTTCTCGACCAAGTTTTCGTTGACG 39511
Query 105295 ATGACGTCGGCAGCGGCAAAAAACGCGAGAACGTGCTTCAAA--AAGAATCGTTCTTTAT 105352
|| |||||| ||||| || || || || || || | | ||||||| ||| || |
Sbjct 39510 ATACCGTCGGAGGCGGCGAAGAAGGCAAGCAC--TCTGGAGATGAAGAATCTTTCGTTTT 39453
Query 105353 CGTTCAGTTTGTTGTTCCAATCGTCAAAGTCTTTGGACATGTCGATTTCTTC 105404
|||||| | |||||||||| |||| | ||| ||||||| ||||||||| ||
Sbjct 39452 CGTTCATTCTGTTGTTCCAGTCGTGGATGTCCTTGGACAAGTCGATTTCCTC 39401
>seq13
Length=154029
Score = 100 bits (110), Expect = 2e-16
Identities = 153/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 24000 TTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATC 24059
||||| ||||| || ||||| || | || || | ||||| || | ||||| ||
Sbjct 46632 TTTGTCAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 46691
Query 24060 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTG 24119
|| | ||||| ||||||| ||||| ||||| || ||||| || ||||| ||| |
Sbjct 46692 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCTCCTGACCAACAAAGATTA 46751
Query 24120 ATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAA 24179
|| | | || |||||| | ||||| | |||| | | || || ||||| |||||
Sbjct 46752 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATCCAAAAG 46811
Query 24180 GAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
||||| || | |||||||| || ||||||||||| ||
Sbjct 46812 GAATCCACTTTACATTTAGTCTTGAGATTGAGAGGTGG 46849
>seq20
Length=304555
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046
||| |||||| | || || || || ||||| || || | |||||| | ||||| || |
Sbjct 8667 CAAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTTGAAGTTGAATC 8726
Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106
|||||||| || | ||||| |||||| ||||| ||||| || || || ||
Sbjct 8727 TTCAGACACCATTGACAATGTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCACCTGA 8786
Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166
||||| ||| |||| | | || |||||| | ||||| | ||||| | || ||
Sbjct 8787 CCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCTGACTA 8846
Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
||||| ||||| || || || | || || || || ||||||||||| ||
Sbjct 8847 CAACATCCAAAAGGAGTCCACTTTACACTTGGTCTTGAGATTGAGAGGTGG 8897
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429935711808525
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