Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242635.1_202017-08-07]
55 sequences; 11,656,823 total letters
Query= NC_007767.1
Length=132959
Score E
Sequences producing significant alignments: (Bits) Value
seq20 98.7 8e-16
seq13 96.9 3e-15
seq26 93.3 4e-14
>seq20
Length=304555
Score = 98.7 bits (108), Expect = 8e-16
Identities = 162/231 (70%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342
|| ||||||||||| ||||| || | || || || || |||||| | ||| || ||
Sbjct 8668 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTTGAAGTTGAATCT 8727
Query 115343 AGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401
||||| || ||||| || || || ||| || || ||||| | || |||
Sbjct 8728 TCAGACACCATT-GACAATGTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCACCTGA 8786
Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461
|| |||||| | || | ||| || || ||||| ||||| | || ||| || | || ||
Sbjct 8787 CCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCTGACTA 8846
Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
||||| ||||| ||||| ||| |||| |||| ||||||||| |||| ||
Sbjct 8847 CAACATCCAAAAGGAGTCCACTTTACACTTGGTCTTGAGATTGAGAGGTGG 8897
>seq13
Length=154029
Score = 96.9 bits (106), Expect = 3e-15
Identities = 155/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 115294 TTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGCGACACTGT 115353
|||||||||||| | || || || ||||| || | ||| || || |||||| |
Sbjct 46631 TTTTGTCAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 46690
Query 115354 TGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAGCAAAGAC 115412
| ||||| || || ||| ||| || || ||||| |||| ||| || ||||||
Sbjct 46691 T-GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCTCCTGACCAACAAAGAT 46749
Query 115413 TTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAACATTCAAA 115472
| || | ||| || || ||||| ||||| | | |||| || | || || ||||| ||||
Sbjct 46750 TAATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATCCAAA 46809
Query 115473 AAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
| || || ||| ||||| | || ||||||||| |||| ||
Sbjct 46810 AGGAATCCACTTTACATTTAGTCTTGAGATTGAGAGGTGG 46849
>seq26
Length=194426
Score = 93.3 bits (102), Expect = 4e-14
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 115379 GATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAA 115438
|| |||||||| |||| ||| || |||||| | || | ||| || || ||||| |||
Sbjct 159008 GACAAAGAAGGTATCCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAA 158949
Query 115439 GATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498
|| | | |||| || |||| || ||||||||||| || || ||| ||||| | || |||
Sbjct 158948 GACGGTAGAACCTTGTCCGACTACAACATTCAAAAGGAATCCACTTTACATTTAGTCTTG 158889
Query 115499 AGATTGCGAGGAGG 115512
|||||| |||| ||
Sbjct 158888 AGATTGAGAGGTGG 158875
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425343714886600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |