Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242635.1_202017-08-07] 55 sequences; 11,656,823 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq17 98.7 9e-16 seq26 84.2 2e-11 >seq17 Length=83854 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || || |||||||||||||||||||| || || | ||| || || || || || Sbjct 56665 GTGGATTCCTTTTGAATGTTGTAATCCGACAGCGTTCTACCGTCTTCCAGTTGTTTACCA 56724 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 ||| | || || | ||| ||||||||||| || ||||| ||||| |||||| |||| Sbjct 56725 GCGAAAATCAACCTCTGTTGGTCCGGAGGAATGCCTTCCTTGTCCTGGATTTTGGACTTG 56784 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | |||||| | || |||| || | |||| || ||||| || || || Sbjct 56785 ACGTTGTCGATAGTATCAGAAGATTCGACCTCCAAAGTAATAGTCTTACCAGTCAGTGTC 56844 Query 131218 TTTACGAAAATCTGCAT 131234 || |||||||| ||||| Sbjct 56845 TTGACGAAAATTTGCAT 56861 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || ||||| ||||||||||||||||| | || | ||| || || || || || Sbjct 56209 GTGGACTCTTTTTGAATGTTGTAATCCGATAGCGTTCTACCGTCTTCCAGTTGTTTACCA 56268 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 ||| | || || | ||| ||||||||||| || ||||| ||||| ||| || |||| Sbjct 56269 GCGAAAATCAACCTCTGTTGGTCCGGAGGAATACCTTCCTTGTCCTGGATCTTAGACTTG 56328 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | || || | | || | || | ||| | ||| |||||||| |||||| Sbjct 56329 ACGTTATCGATGGTGTCAGAATATTCAACCTCCAAGGTTATGGTCTTACCGGTCAGAGTT 56388 Query 131218 TTTACGAAAATCTGCAT 131234 || || ||||||||||| Sbjct 56389 TTGACAAAAATCTGCAT 56405 >seq26 Length=194426 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | ||| | || |||||||||| || || ||||||||||||||||| ||| | Sbjct 158875 CCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGAC 158934 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| | ||| || | ||||| || || |||| || | || ||||| || ||| Sbjct 158935 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 158994 Query 131128 ATTCCTTCTTTGTC 131141 || ||||||||||| Sbjct 158995 ATACCTTCTTTGTC 159008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012475491200