Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242635.1_202017-08-07]
55 sequences; 11,656,823 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq20 123 2e-23
seq13 122 6e-23
seq26 109 4e-19
seq17 107 1e-18
seq49 84.2 1e-11
>seq20
Length=304555
Score = 123 bits (136), Expect = 2e-23
Identities = 166/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149
|||||||||||| | ||| ||||| || | |||| ||||||||| || ||||| |||||
Sbjct 8898 ACCACCTCTCAATCTCAAGACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGA 8839
Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209
|||| | |||| || ||||| || || ||||| || | | |||||| || | ||
Sbjct 8838 CAAAGTTCTGCCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 8779
Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269
| ||||| ||||| ||| || ||| ||||| | | || ||| | ||||||
Sbjct 8778 AATACCTTCCTTGTCTTGAATCTTAGACTTGACATTGTCAATGGTGTCTGAAGATTCAAC 8719
Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320
||| | |||||||| ||||| || || || || ||||| || ||||| ||
Sbjct 8718 TTCAAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 8668
>seq13
Length=154029
Score = 122 bits (134), Expect = 6e-23
Identities = 159/220 (72%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||||||||| | ||| || ||||| | |||| |||||||| || ||||| ||||
Sbjct 46851 TACCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAG 46792
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
|||| | |||| || ||||| || || ||||| |||| | |||||| || | |
Sbjct 46791 ACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAG 46732
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
||| ||||| ||||| ||| ||| ||| ||||| | | ||| || | |||||
Sbjct 46731 GGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAA 46672
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAA 38308
|||| || || || || ||||| ||||| ||||| || ||
Sbjct 46671 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTTTTGACAAA 46632
>seq26
Length=194426
Score = 109 bits (120), Expect = 4e-19
Identities = 156/220 (71%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||||||||| | ||| || ||||| | |||| ||||||||||| ||||| || |
Sbjct 158873 TACCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGG 158932
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
|||| | |||| || ||||| || || ||||| || | | |||||| || | |
Sbjct 158933 ACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 158992
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
||| ||||||||||| ||| || || ||||| | | || || | |||||
Sbjct 158993 GGATACCTTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCAGAAGATTCAA 159052
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAA 38308
|||||| || || || ||||| ||||| || || |||||
Sbjct 159053 CTTCTAGAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 159092
>seq17
Length=83854
Score = 107 bits (118), Expect = 1e-18
Identities = 164/233 (70%), Gaps = 8/233 (3%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
|||||||||| | | | ||||| ||||||||| ||||||||||| |||||||| |
Sbjct 56633 TACCACCTCTTAGCCTTAGGACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCCG 56692
Query 38149 ACAAAACACGTT----CGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCG 38204
||| |||| |||| || | |||||| || || || || | | ||||| ||
Sbjct 56693 ACA----GCGTTCTACCGTCTTCCAGTTGTTTACCAGCGAAAATCAACCTCTGTTGGTCC 56748
Query 38205 GAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTT 38264
| || | |||||| |||||| ||||| ||| || || | || |||||| | |
Sbjct 56749 GGAGGAATGCCTTCCTTGTCCTGGATTTTGGACTTGACGTTGTCGATAGTATCAGAAGAT 56808
Query 38265 TCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|| || || || |||||||| ||||| |||| || || ||||| || |||||
Sbjct 56809 TCGACCTCCAAAGTAATAGTCTTACCAGTCAGTGTCTTGACGAAAATTTGCAT 56861
>seq49
Length=358244
Score = 84.2 bits (92), Expect = 1e-11
Identities = 203/297 (68%), Gaps = 14/297 (5%)
Strand=Plus/Plus
Query 6199 CGTTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTA 6258
|||||||||| ||||||||||| | ||| || |||||||| |||| || |||||||
Sbjct 89723 CGTTCTACCGTTACAAAATGCCTCCAATCCAGGCTAAGGTCGAAGGTAGAGGTAACGGTA 89782
Query 6259 TTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGAC-GCCCTGCCACC 6317
| ||||| | || | ||| || |||| |||| | ||| | | || | |||||| |
Sbjct 89783 TCAAAACAGCAATCCTGAACGTGGCTGACATCGCCCATGCG-TTGAACAGACCTGCCCCA 89841
Query 6318 TAC-CCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGAC--GCAGTTTGATC-ACAA 6373
||| || | || || ||||| | |||||| || ||||| || | || ||| ||||
Sbjct 89842 TACATCGTC-AAGTACTTCGGTTTCGAACTGGGTGCTCAAACCTCTATTTCCATCGACAA 89900
Query 6374 AAACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGA 6433
| || || | | || ||||| ||| | |||| ||| |||| ||| | | ||
Sbjct 89901 A---GATCGTTATTTGGTCAACGGTGTTCATGAACCTGCTAAGTTGCAAGACGTGTTGGA 89957
Query 6434 CGGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAA--TGCGATAACCCGGAGACCGAG 6488
||| || || || |||||| || ||| |||| || | || || || ||||||
Sbjct 89958 CGGGTTCATCAACAGGTTTGTTCTTTGT--GGAAGTTGTAAGAATCCAGAAACCGAG 90012
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334946975480705
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |