Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242635.1_202017-08-07] 55 sequences; 11,656,823 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq17 145 7e-30 seq26 134 1e-26 seq13 125 6e-24 seq20 109 5e-19 >seq17 Length=83854 Score = 145 bits (160), Expect = 7e-30 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055 || |||||||| || || ||||| |||| ||||| | || || | || || || || Sbjct 56864 ACTATGCAAATTTTCGTCAAGACACTGACTGGTAAGACTATTACTTTGGAGGTCGAATCT 56805 Query 25056 TCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| |||||||| | ||| |||||| ||||| ||||| ||||| || ||| Sbjct 56804 TCTGATACTATCGACAACGTCAAGTCCAAAATCCAGGACAAGGAAGGCATTCCTCCGGAC 56745 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 |||||| || | ||||| || || |||||| | ||||| | | | || || |||||| Sbjct 56744 CAACAGAGGTTGATTTTCGCTGGTAAACAACTGGAAGACGGTAGAACGCTGTCGGATTAC 56685 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || |||||||| |||||||| || || || || |||||||||||||| || Sbjct 56684 AACATTCAAAAGGAATCCACTCTTCACTTGGTCCTAAGGCTAAGAGGTGG 56635 Score = 143 bits (158), Expect = 2e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| || ||| |||||||||| |||| || | || || || | ||| Sbjct 56405 ATGCAGATTTTTGTCAAAACTCTGACCGGTAAGACCATAACCTTGGAGGTTGAATATTCT 56346 Query 25059 GACACTATCGAGTCAC-TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| ||||| | || | ||| || ||| ||||| ||||| ||||| || ||||| Sbjct 56345 GACACCATCGA-TAACGTCAAGTCTAAGATCCAGGACAAGGAAGGTATTCCTCCGGACCA 56287 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||| || | ||||| || || |||||| | ||||| | | | || | |||||||| Sbjct 56286 ACAGAGGTTGATTTTCGCTGGTAAACAACTGGAAGACGGTAGAACGCTATCGGATTACAA 56227 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||||||||| ||||| || || || || |||||||||||||| || Sbjct 56226 CATTCAAAAAGAGTCCACTCTTCACTTGGTCCTAAGGCTAAGAGGTGG 56179 >seq26 Length=194426 Score = 134 bits (148), Expect = 1e-26 Identities = 164/221 (74%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 || || ||||||||||| ||||| ||||||| | ||||| || || |||||||| || Sbjct 159092 TTCGTTAAGACTTTGACTGGTAAGACCATCACTCTAGAAGTTGAATCTTCTGACACCATT 159033 Query 25068 GAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGG 25124 || || || || | || | ||| ||||||||||| || |||||||||||||| | Sbjct 159032 GA--CAATGTCAAATCCAAGATTCAA-GACAAAGAAGGTATCCCACCTGACCAACAAAGA 158976 Query 25125 ATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAA 25184 | || ||||| || || ||||| ||||| | | | || || ||| ||||| |||||| Sbjct 158975 TTGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAACATTCAA 158916 Query 25185 AAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || |||||||| |||||||||| | || | ||||| || Sbjct 158915 AAGGAATCCACTTTACATTTAGTCTTGAGATTGAGAGGTGG 158875 >seq13 Length=154029 Score = 125 bits (138), Expect = 6e-24 Identities = 163/221 (74%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 ||||| || |||||||| ||||| ||||||| | ||||| || || ||||||||||| Sbjct 46632 TTTGTCAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 46691 Query 25068 GAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGG 25124 || || || ||| |||| | ||| ||||| ||||| || || ||||||||||| | Sbjct 46692 GA--CAATGTCAAGTCAAAGATTCA-AGACAAGGAAGGTATCCCTCCTGACCAACAAAGA 46748 Query 25125 ATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAA 25184 | || ||||| || || ||||| ||||| | | | || || || ||||| || ||| Sbjct 46749 TTAATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATCCAA 46808 Query 25185 AAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || |||||||| |||||||||| | || | ||||| || Sbjct 46809 AAGGAATCCACTTTACATTTAGTCTTGAGATTGAGAGGTGG 46849 >seq20 Length=304555 Score = 109 bits (120), Expect = 5e-19 Identities = 165/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || |||||||| |||||||| | || || | ||||| || || || Sbjct 8671 ATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTTGAAGTTGAATCTTCA 8730 Query 25059 GACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| || || || || ||| | || | ||| ||||| ||||| |||||||||||| Sbjct 8731 GACACCATTGA--CAATGTCAAGTCTAAGATTCAA-GACAAGGAAGGTATTCCACCTGAC 8787 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 ||||| | | || ||||| || || ||||| ||||| | | ||| || || ||| Sbjct 8788 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCTGACTAC 8847 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || ||||| || ||||| |||| || || | || | ||||| || Sbjct 8848 AACATCCAAAAGGAGTCCACTTTACACTTGGTCTTGAGATTGAGAGGTGG 8897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327709534825