Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242635.1_202017-08-07]
55 sequences; 11,656,823 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq20 181 2e-40
seq17 170 4e-37
seq13 152 9e-32
seq26 143 5e-29
seq28 95.1 2e-14
>seq20
Length=304555
Score = 181 bits (200), Expect = 2e-40
Identities = 168/213 (79%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||||| |||||||| ||||||||||| || || || | || || || ||
Sbjct 8883 CAAGACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCGTC 8824
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || ||||| || || || || | |||||||||||| |||||||| |||||||||||
Sbjct 8823 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTC 8764
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||||||||| | |||||| || |||||||||| ||||| ||||| | ||| || ||
Sbjct 8763 TTGAATCTTAGACTTGACATTGTCAATGGTGTCTGAAGATTCAACTTCAAGGGTAATAGT 8704
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || | ||||||||||| || |||||
Sbjct 8703 CTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 8671
>seq17
Length=83854
Score = 170 bits (188), Expect = 4e-37
Identities = 163/209 (78%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||||||| || |||||||||||||| ||||| ||||| || || || || || |||||
Sbjct 56197 ACCAAGTGAAGAGTGGACTCTTTTTGAATGTTGTAATCCGATAGCGTTCTACCGTCTTCC 56256
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| || || || ||||| || | || |||||||| || ||||| ||||||||||| ||
Sbjct 56257 AGTTGTTTACCAGCGAAAATCAACCTCTGTTGGTCCGGAGGAATACCTTCCTTGTCCTGG 56316
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| | ||||||| ||||||||||| | |||| || |||||||| ||||| ||
Sbjct 56317 ATCTTAGACTTGACGTTATCGATGGTGTCAGAATATTCAACCTCCAAGGTTATGGTCTTA 56376
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || || ||||| || ||||||||
Sbjct 56377 CCGGTCAGAGTTTTGACAAAAATCTGCAT 56405
Score = 156 bits (172), Expect = 8e-33
Identities = 160/209 (77%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||||||| || || || || ||||| ||||| ||||| || || || || ||||||||
Sbjct 56425 ACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCCGACAGCGTTCTACCATCTTCC 56484
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
||||| || || || || || | ||| |||||||| |||||||| ||||||||||| ||
Sbjct 56485 AACTGTTTACCTGCAAAAATCAATCTCTGTTGGTCTGGTGGAATACCTTCCTTGTCCTGG 56544
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| ||| || || |||||||| | ||||| || ||||| ||||| || ||
Sbjct 56545 ATCTTACTCTTCACATTGTCTATGGTGTCAGAAGATTCGACCTCCAAAGTGATAGTCTTA 56604
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || || ||||| || ||||||||
Sbjct 56605 CCAGTTAGAGTTTTGACAAAAATCTGCAT 56633
Score = 152 bits (168), Expect = 9e-32
Identities = 159/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||||||| || ||||| || ||||| ||||| ||||| || || || || || |||||
Sbjct 56653 ACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCCGACAGCGTTCTACCGTCTTCC 56712
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| || || || ||||| || | || |||||||| || ||||||||||||||||| ||
Sbjct 56713 AGTTGTTTACCAGCGAAAATCAACCTCTGTTGGTCCGGAGGAATGCCTTCCTTGTCCTGG 56772
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
|| || | ||||||| ||||| || || | ||||| || ||||| || || || ||
Sbjct 56773 ATTTTGGACTTGACGTTGTCGATAGTATCAGAAGATTCGACCTCCAAAGTAATAGTCTTA 56832
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || ||||||||||| || |||||
Sbjct 56833 CCAGTCAGTGTCTTGACGAAAATTTGCAT 56861
Score = 145 bits (160), Expect = 1e-29
Identities = 173/235 (74%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 68227 TTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTAT 68286
||||||| || || | || | || |||||||| || || || || ||||| |||||||
Sbjct 55943 TTTAATTGCCACCTCTTAGTCTCAGGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTAT 56002
Query 68287 AATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGT 68346
| || || || || || |||||||| | || ||||| || || || | ||| |||||||
Sbjct 56003 AGTCTGACAGCGTTCTACCATCTTCCAGTTGTTTCCCTGCAAAAATCAATCTCTGTTGGT 56062
Query 68347 CGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG 68406
| |||||||| ||||||||||| || ||||| ||| || || |||||||| | |
Sbjct 56063 CTGGTGGAATACCTTCCTTGTCCTGGATCTTACTCTTCACATTGTCTATGGTGTCAGAAG 56122
Query 68407 ATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||| || || || ||||| || || || || | || ||||| || || |||||
Sbjct 56123 ATTCGACCTCTAAAGTGATAGTCTTACCAGTTAAAGTTTTGACAAAAATTTGCAT 56177
>seq13
Length=154029
Score = 152 bits (168), Expect = 9e-32
Identities = 156/204 (76%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| || || |||| ||||| || ||||||||||| || || || | || || || ||
Sbjct 46835 CAAGACTAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTC 46776
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || ||||| || || || || | |||||||||||| || || || |||||||||||
Sbjct 46775 TTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAGGGATACCTTCCTTGTC 46716
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||||||||||| |||||| || || ||||| | ||||| |||||||| ||||||||
Sbjct 46715 TTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGT 46656
Query 68429 TTTTCCCGTGAGGGTCTTGACGAA 68452
|| || || | || ||||| ||
Sbjct 46655 CTTACCAGTCAAAGTTTTGACAAA 46632
>seq26
Length=194426
Score = 143 bits (158), Expect = 5e-29
Identities = 154/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| || || |||| ||||| || ||||| ||||| || ||||| | || || || ||
Sbjct 158889 CAAGACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGACAAGGTTCTACCGTC 158948
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || ||||| || || || || | |||||||||||| ||||| || ||||| |||||
Sbjct 158949 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTTGTC 159008
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||||||||| | ||||| || |||||||| | ||||| ||||| | ||||||||
Sbjct 159009 TTGAATCTTGGATTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCTAGAGTGATGGT 159068
Query 68429 TTTTCCCGTGAGGGTCTTGACGAA 68452
|| || || | ||||| |||||
Sbjct 159069 CTTACCAGTCAAAGTCTTAACGAA 159092
>seq28
Length=374213
Score = 95.1 bits (104), Expect = 2e-14
Identities = 282/431 (65%), Gaps = 8/431 (2%)
Strand=Plus/Minus
Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994
|||||| || ||||| ||||| || || || | ||||||||||||| ||| || |
Sbjct 40216 CATGACACCGGCCTTTTGGTAGTCGGAGACTCTCTTTTCGAAGAAGTTGGTCTTACCGGC 40157
Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054
| ||||||| |||||||| || |||||||| ||| | | | ||| || |||
Sbjct 40156 CAAGGAAATGTTTTCCATGAAATCGAAGGGGTTGTCGACCTTGTAGTACTTCTTGTTACC 40097
Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114
|| || || | | ||| || |||||||||| ||| ||| |||||| ||| | |||
Sbjct 40096 GAAGGCGACCAAGAGTCTGTCTGCGACGAACTCGACGTATTGGTTCATCAAGTCGGCGTT 40037
Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGT-CCTT--TTCGTTGGCGAC 10171
||| || | || | | || | |||||| | ||||| ||| |||| | ||||
Sbjct 40036 CATACCTAGCAAGGCGACTGGCAAGGCGTC---TAGGAAGTATCTTTGTTCGATCTCGAC 39980
Query 10172 CGCTTCCTCGACGATGCTCTTTACCACGTCAAGGGACAGCTTGTTCTCGAGCTTCGAATA 10231
|| || |||||| ||| || | | | || | ||||||| | | | | |
Sbjct 39979 GGCCTCGGTGACGATTTTCTCGACGATGGCTGGGTCCGGCTTGTTTTTCAAGTGGGCGAA 39920
Query 10232 CAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAA 10291
|| | |||| | ||| | || ||||| | || ||| | |||||||| ||
Sbjct 39919 CAACAAACAGGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAGTTCGTTGGAGAA 39860
Query 10292 ACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGA 10351
|| ||||||||| | || | || || |||||| |||| | ||| ||||||||
Sbjct 39859 GGTCAAACCGGGCATCATACCTCTTTTCTTCAACCAGAAGATGGAGGCGAAGGACCCGGA 39800
Query 10352 GAACAGAAGAC 10362
|| |||||||
Sbjct 39799 GA--AGAAGAC 39791
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921621766384600
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