Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242635.1_202017-08-07]
55 sequences; 11,656,823 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq17 136 3e-27
seq26 111 1e-19
>seq17
Length=83854
Score = 136 bits (150), Expect = 3e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| || | ||| || | || || || | || || ||||||||||||||||||||
Sbjct 56176 ATACCACCTCTTAGCCTTAGGACCAAGTGAAGAGTGGACTCTTTTTGAATGTTGTAATCC 56235
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || | | ||||| ||||||||||||||| | || | | |||||||||||||
Sbjct 56236 GATAGCGTTCTACCGTCTTCCAGTTGTTTACCAGCGAAAATCAACCTCTGTTGGTCCGGA 56295
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||| ||||| ||||| ||||| || | | || | |||||| | ||||
Sbjct 56296 GGAATACCTTCCTTGTCCTGGATCTTAGACTTGACGTTATCGATGGTGTCAGAATATTCA 56355
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| ||| | || || |||||||||||||| ||||||||||||||
Sbjct 56356 ACCTCCAAGGTTATGGTCTTACCGGTCAGAGTTTTGACAAAAATCTGCAT 56405
Score = 122 bits (134), Expect = 7e-23
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| || | |||||| | || || || | |||||||| |||||||||||||||||
Sbjct 56404 ATACCACCTCTTAGTCTTAGGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCC 56463
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || | | |||||| | |||||||| || | || | | ||||||||| ||
Sbjct 56464 GACAGCGTTCTACCATCTTCCAACTGTTTACCTGCAAAAATCAATCTCTGTTGGTCTGGT 56523
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||| ||||| ||||| ||||| || | | || | |||||| | ||||||
Sbjct 56524 GGAATACCTTCCTTGTCCTGGATCTTACTCTTCACATTGTCTATGGTGTCAGAAGATTCG 56583
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | || || || || |||||||| ||||||||||||||
Sbjct 56584 ACCTCCAAAGTGATAGTCTTACCAGTTAGAGTTTTGACAAAAATCTGCAT 56633
Score = 113 bits (124), Expect = 4e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| || | ||| || | || || || | || ||||| |||||||||||||||||
Sbjct 56632 ATACCACCTCTTAGCCTTAGGACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCC 56691
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || | | ||||| ||||||||||||||| | || | | |||||||||||||
Sbjct 56692 GACAGCGTTCTACCGTCTTCCAGTTGTTTACCAGCGAAAATCAACCTCTGTTGGTCCGGA 56751
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||||||||| ||||| || || || | | || | || || | ||||||
Sbjct 56752 GGAATGCCTTCCTTGTCCTGGATTTTGGACTTGACGTTGTCGATAGTATCAGAAGATTCG 56811
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | || || || ||||| || || || ||||| |||||
Sbjct 56812 ACCTCCAAAGTAATAGTCTTACCAGTCAGTGTCTTGACGAAAATTTGCAT 56861
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215
|| || | |||||||| || || || | |||||||| ||||||||||| || || |
Sbjct 55951 CCACCTCTTAGTCTCAGGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTATAGTCTGAC 56010
Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275
| || | | |||||| |||||||| || || | || | | ||||||||| || |||
Sbjct 56011 AGCGTTCTACCATCTTCCAGTTGTTTCCCTGCAAAAATCAATCTCTGTTGGTCTGGTGGA 56070
Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335
|| ||||| ||||| ||||| || | | || | |||||| | ||||||||
Sbjct 56071 ATACCTTCCTTGTCCTGGATCTTACTCTTCACATTGTCTATGGTGTCAGAAGATTCGACC 56130
Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| | || | || || || || | |||||| |||||||| |||||
Sbjct 56131 TCTAAAGTGATAGTCTTACCAGTTAAAGTTTTGACAAAAATTTGCAT 56177
>seq26
Length=194426
Score = 111 bits (122), Expect = 1e-19
Identities = 157/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| || | | |||||| |||||||||| || ||||| |||||||||||||| |||
Sbjct 158872 ATACCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCG 158931
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || | | ||||| | ||| |||||||| |||| | | |||||||| ||
Sbjct 158932 GACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGT 158991
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || ||||||||||| |||||| ||| | | |||| |||||| | |||||
Sbjct 158992 GGGATACCTTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCAGAAGATTCA 159051
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 114373
|| || | || | || || || |||| ||| || || ||
Sbjct 159052 ACTTCTAGAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 159092
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420134118378660
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |