Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242635.1_202017-08-07] 55 sequences; 11,656,823 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq4 168 8e-37 seq2 105 8e-18 >seq4 Length=235297 Score = 168 bits (186), Expect = 8e-37 Identities = 770/1206 (64%), Gaps = 30/1206 (2%) Strand=Plus/Minus Query 114103 CCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGG 114162 |||||| || || || || |||||||| || ||||| || || | || || |||||||| Sbjct 178557 CCACATGTCGAATTGAAGTATACCTTGAGAAGCTGGAGAGCCTTGGAAGGTTTCGTATGG 178498 Query 114163 GCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAA 114222 ||| || | || | || | || || | || || || ||||| || ||||| Sbjct 178497 GCCATCTCTTTGAGCTAGCTCACAAGAGGCTTCCATGGAAGCATGGTACATGGTTTCAAA 178438 Query 114223 AATGCGAGCATTCATT--GCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATA 114280 || | ||| | | || | || || ||||| || || | | || |||| || Sbjct 178437 GATTTGTATATTTAGTAAGCGT--GCTTCTTCGGAGTCGAATGGTAAACGCAACAACATG 178380 Query 114281 AATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTT 114340 || || || | |||||||||||| | |||| || | |||||||||||||| || Sbjct 178379 AAAGTGTCAGCCAAACCTTGGACACCCAAAGCAATCGGCCTGTGTCTCATATTAGATCTT 178320 Query 114341 CGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACA 114400 | || ||| || |||||| | || | || ||||| | |||| || |||| | Sbjct 178319 CTTGCTTCCTCGACAGGATAATAGTTACGGTCAATAACGTTGTTTAAGTTACGAGTGATA 178260 Query 114401 ACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCT------CTTCA--- 114451 || || | |||||||| ||||||| | | | | | | ||| | ||||| Sbjct 178259 ACTTTAGAAATTTCATGTAGCTTTTTGAAGTTATATGTAGAAGTTTTGCCGTCTTCAGAT 178200 Query 114452 -TTGACATACTTA--GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTA 114508 || ||| | || | || | || |||| ||||| |||| |||||||| | Sbjct 178199 GTTTCAATAAATGCTGGCAAAGCAACAGAAGCCAAGTTACAAACAGCAGTCTCATCTGGA 178140 Query 114509 TCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTT 114568 | | ||| || | |||||| ||||| || || ||| || |||||||||||| Sbjct 178139 GCGGAGTATTCAACAATTTCACAGCACAAGTTAGACGACTTGATAACACCCAAGTTCTTT 178080 Query 114569 TGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTT 114628 || || || || ||||||| ||||||||||||| | | || || || || |||||| Sbjct 178079 TGGTTGGATTTCCTGTTACAAGCATCCTTGTAAACAACAAAGGGTGTACCAGTTTCCGTT 178020 Query 114629 TGGGACTTGAGAATAGCCTTCCAGACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCC 114688 || | | | |||| | ||| | | ||| | ||| || | || || Sbjct 178019 TGTGCTTCCAATATAGAGTACCACAATTTTTGGGCCTTGATAGTC---TTACCACGGCCT 177963 Query 114689 TCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACG--GCCTCTGAGAGCC 114746 || | ||||| || || ||||||||||| || ||||| | | | || | |||| Sbjct 177962 TCTTTTTCGTAACGGGTATATAGGGCTTCAAATTCGTCACCGTAGCAGTCACTTA-AGCC 177904 Query 114747 CTGGTGCCTTATCTGGGC-AGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATG 114805 ||| ||| || | || |||| | || ||| || || || |||||||||||| Sbjct 177903 -TGGAGCCG-ATGTAGGAGAGAATAAAGTCCAAGTGCCGTTTTCTTCGACACGCTTCATG 177846 Query 114806 AAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCC 114865 || || || || | ||| ||||||| ||| | ||| | || |||||| | || Sbjct 177845 AAAAGATCGGGAACCCATAGAGCTGGGAATAAATCTCTCGCACGGATTTCTTCCTTACCG 177786 Query 114866 TGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACC 114925 ||||| | | || | ||||| | |||||| |||||||| || |||| || | Sbjct 177785 TGATTCTTTCTAATGTCGATGAAGTCGAAGATATCAGCGTGCCATGGCTCCAAATATAGA 177726 Query 114926 GCGATTG-ACCCCTTACGACG--ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAAT 114982 || | | ||| | | |||| |||||| ||||| | || ||| || || Sbjct 177725 GCAAAGGCACCAGGTCTCTTGTTACCACCCTGGTCAACATAACGGGCAGTGTTGTTGAAG 177666 Query 114983 ACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTA 115042 || || | ||| ||||| | || | ||| || || || || ||| ||| Sbjct 177665 ACACGGATCATAGGAATTAACCCGTTAGAAGTCCCGTTCGTACCAGCAATGTAAGAGCCG 177606 Query 115043 TTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCG 115102 | || | | | || || || | ||||||||| || || || || || || Sbjct 177605 GTTGCACGAATGTTGTGAATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCA 177546 Query 115103 CACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAG 115162 || ||| | | | || ||||||| || || || || ||| |||| |||| | ||||| Sbjct 177545 CATTCCTTCAAAGTGTCGTAGATACCTTCAATGGAATCATCCTTCATTGCAACTAGGAAA 177486 Query 115163 CAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATG 115222 ||| |||||||| ||| ||||||||||||||||||| | ||||| | ||||| | Sbjct 177485 CAGGAGGACATTTGAGGCTTTGGTGTACCAGCGTTGAATAAAGTTGGAGAGGCGTGAGTA 177426 Query 115223 AACATACCTT-GGGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTG 115281 || || || |||||||| | ||||| || | |||| ||||| || ||||| Sbjct 177425 AAG-TATTTTAGGGACATCAAGTTATAGGTTTCTAGAGCGGCCTCAATGTTATCACCGTG 177367 Query 115282 AATACC 115287 |||||| Sbjct 177366 AATACC 177361 >seq2 Length=549560 Score = 105 bits (116), Expect = 8e-18 Identities = 135/186 (73%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 160691 CCAGTAGGTGTCTACGGTCGCGTGGCACCAAGATCTGGTCTCGCTGTGAAGAGTGGTATC 160750 ||||| ||| ||||||| | | || |||||||| || || || ||||| | ||||| Sbjct 461626 CCAGTCGGTACCTACGGTAGAATCGCGCCAAGATCAGGCCTAGCAGTGAAAAACGGTATT 461685 Query 160751 CAAGTTGGTGCGGGTGTTGTGGATCCAGACTACACAGGTGAAGTCAAAGTCGTTCTCTTC 160810 ||| ||||| |||||||| || ||||||||| ||||||||||| || | | || Sbjct 461686 CAAACGGGTGCTGGTGTTGTCGACAGAGACTACACCGGTGAAGTCAAGGTTATCTTATTT 461745 Query 160811 AATCACGGGCACACAGATTTCCAAATCAAAAGGGGGGATCGCATCGCGCAACTCATCTTA 160870 ||||| || | |||||| ||||||| || ||||| ||||| ||| | ||||| Sbjct 461746 AATCATTCACAGAAGGATTTCGCGATCAAAAAAGGTGATCGTATCGCCCAATTGATCTTG 461805 Query 160871 GAGAGG 160876 || ||| Sbjct 461806 GAAAGG 461811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353189319400