Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242635.1_202017-08-07] 55 sequences; 11,656,823 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq4 134 1e-26 seq14 87.8 2e-12 >seq4 Length=235297 Score = 134 bits (148), Expect = 1e-26 Identities = 298/445 (67%), Gaps = 8/445 (2%) Strand=Plus/Plus Query 93907 TTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAACAAGGCC 93966 |||||||| || || || ||| || ||||| || |||||||| | | | |||| Sbjct 177448 TTCAACGCTGGTACACCAAAGCCTCAAATGTCCTCCTGTTTCCTAGTTGCAATGAAGGAT 177507 Query 93967 GACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATACGCG 94026 || ||||| || || | ||||| | ||||| ||||| || || ||| || Sbjct 177508 GATTCCATTGAAGGTATCTACGACACTTTGAAGGAATGTGCTTTGATTTCCAAAACTGCT 177567 Query 94027 GGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTACC 94086 || || || || | | | ||| || | ||||| | || || ||||| ||||| Sbjct 177568 GGTGGTATTGGTCTACATATTCACAACATTCGTGCAACCGGCTCTTACATTGCTGGTACG 177627 Query 94087 AATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTAC 94146 || || || || ||||| | | |||||| |||| |||||||||||| | || || || Sbjct 177628 AACGGGACTTCTAACGGGTTAATTCCTATGATCCGTGTCTTCAACAACACTGCCCGTTAT 177687 Query 94147 GTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCAC 94206 || |||||||||||| | ||| ||| | || || | ||| | ||||| |||||| Sbjct 177688 GTTGACCAGGGTGGTAACAAGAGACCTGGTGCCTTTGCTCTATATTTGGAGCCATGGCAC 177747 Query 94207 GCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGA---GG 94263 || || | | ||||||||| | ||||||| ||||| || || || | | Sbjct 177748 GCTGATATCTTCGACTTCATCGACATTAGAAAGAATCACGGTAAGGA---AGAAATCCGT 177804 Query 94264 GCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAA 94323 || ||||| | ||| ||||| ||||| || || ||||| ||||| || ||||| || Sbjct 177805 GCGAGAGATTTATTCCCAGCTCTATGGGTTCCCGATCTTTTCATGAAGCGTGTCGAAGAA 177864 Query 94324 AACTCCGCCTGGAGTCTTTTTTGTC 94348 ||| | | |||| |||| || || Sbjct 177865 AACGGCACTTGGA--CTTTATTCTC 177887 >seq14 Length=143611 Score = 87.8 bits (96), Expect = 2e-12 Identities = 179/266 (67%), Gaps = 0/266 (0%) Strand=Plus/Minus Query 93896 CCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGA 93955 |||| || || || || || || || || || || |||||||| ||||||||||| Sbjct 8302 CCCCCACTCTATTTAATGCCGGTACGCCACACCCTCAAATGTCTTCTTGTTTCCTGATTG 8243 Query 93956 CGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCT 94015 | | |||| |||||||||| || |||| ||||| | || || ||||| | || | Sbjct 8242 CCATGAAGGACGACTCCATCGAAGGTATTTACGACACTTTGAAAGAGTGTGCCATGATTT 8183 Query 94016 CAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACA 94075 | || || || || | || | | || || | | ||| ||| || || || | Sbjct 8182 CCAAGACTGCAGGTGGTGTTGGTCTTCATATCAACAATATTCGTTCCACAGGCTCTTATA 8123 Query 94076 TCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACG 94135 | |||||||| || || || || || | | || ||| |||| || ||||| ||| Sbjct 8122 TTGCAGGTACCAACGGTACTTCAAATGGGTTGATTCCCATGATCCGTGTATTCAATAACA 8063 Query 94136 CGGCGCGCTACGTGGACCAGGGTGGT 94161 | || || ||||||||||| |||||| Sbjct 8062 CTGCACGTTACGTGGACCAAGGTGGT 8037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722859877800