Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242635.1_202017-08-07]
55 sequences; 11,656,823 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq13 105 7e-18
seq26 104 2e-17
seq17 98.7 1e-15
seq20 87.8 2e-12
>seq13
Length=154029
Score = 105 bits (116), Expect = 7e-18
Identities = 158/221 (71%), Gaps = 4/221 (2%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | ||| |||||||||| | || |||||||| ||||||||||| |
Sbjct 46849 CCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAC 46790
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || | ||| || | ||| ||||| | | |||||| | |||||||| |||||
Sbjct 46789 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAGGG 46730
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565
|||||||| ||||| ||| | |||| || |||| || | ||||| | || || |
Sbjct 46729 ATACCTTCCTTGTC-TTGAATCTTTGACTTGACATTG-TCAATAGTGTCAGAAGATTCAA 46672
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAA 138606
| || | || | || |||||||||| |||||| ||||||
Sbjct 46671 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTTTTGACAAAA 46631
>seq26
Length=194426
Score = 104 bits (114), Expect = 2e-17
Identities = 157/220 (71%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | ||| |||||||||| | || ||||||||||||||||||||| |
Sbjct 158875 CCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGAC 158934
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || | ||| || | ||| ||||| | | |||| | | |||||||| || ||
Sbjct 158935 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 158994
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTT--AATTGTTCCACGGTGTCGGTCGACTCCA 138565
|||||||||||||| ||| | || | ||| |||| || | |||||| | || || |
Sbjct 158995 ATACCTTCTTTGTC-TTGAATCTTGGATTTGACATTG-TCAATGGTGTCAGAAGATTCAA 159052
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAA 138605
| || | || | || |||||||||| ||| || || ||
Sbjct 159053 CTTCTAGAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 159092
>seq17
Length=83854
Score = 98.7 bits (108), Expect = 1e-15
Identities = 138/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
||||| |||||||||||||| || | || | ||| || ||||||||||| |
Sbjct 56212 GACTCTTTTTGAATGTTGTAATCCGATAGCGTTCTACCGTCTTCCAGTTGTTTACCAGCG 56271
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
| || | | ||||||||||||||| |||||||| ||||| ||| || || |
Sbjct 56272 AAAATCAACCTCTGTTGGTCCGGAGGAATACCTTCCTTGTCCTGGATCTTAGACTTGACG 56331
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | |||||| | | || ||||| | || | || ||||| |||||||||||
Sbjct 56332 TTATCGATGGTGTCAGAATATTCAACCTCCAAGGTTATGGTCTTACCGGTCAGAGTTTTG 56391
Query 138601 ACAAAAATCTGCAT 138614
||||||||||||||
Sbjct 56392 ACAAAAATCTGCAT 56405
Score = 93.3 bits (102), Expect = 4e-14
Identities = 139/195 (71%), Gaps = 2/195 (1%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|| ||||||||||||||||| || || || | || || | |||||||| | |
Sbjct 56440 GATTCCTTTTGAATGTTGTAATCCGACAGCGTTCTACCATCTTCCAACTGTTTACCTGCA 56499
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539
| || | | ||||||||| || || |||||||| ||||| ||| || || | |
Sbjct 56500 AAAATCAATCTCTGTTGGTCTGGTGGAATACCTTCCTTGTCCTGGATCTTACTCTTCACA 56559
Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599
|||| | | |||||| | || || ||||| | || | || |||||||| ||||||||
Sbjct 56560 TTGT-CTATGGTGTCAGAAGATTCGACCTCCAAAGTGATAGTCTTACCAGTTAGAGTTTT 56618
Query 138600 TACAAAAATCTGCAT 138614
||||||||||||||
Sbjct 56619 GACAAAAATCTGCAT 56633
Score = 87.8 bits (96), Expect = 2e-12
Identities = 138/195 (71%), Gaps = 2/195 (1%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|| |||||||||||||| ||||| || || | || || |||||||| || | |
Sbjct 55984 GATTCCTTTTGAATGTTATAGTCTGACAGCGTTCTACCATCTTCCAGTTGTTTCCCTGCA 56043
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGAT-TTTTTGTTTTAA 138539
| || | | ||||||||| || || |||||||| ||||| ||| || | || |
Sbjct 56044 AAAATCAATCTCTGTTGGTCTGGTGGAATACCTTCCTTGTCCTGGATCTTACTCTTCACA 56103
Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599
||| || | |||||| | || || ||||| | || | || |||||||| | ||||||
Sbjct 56104 TTG-TCTATGGTGTCAGAAGATTCGACCTCTAAAGTGATAGTCTTACCAGTTAAAGTTTT 56162
Query 138600 TACAAAAATCTGCAT 138614
|||||||| |||||
Sbjct 56163 GACAAAAATTTGCAT 56177
Score = 84.2 bits (92), Expect = 2e-11
Identities = 135/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|| ||||||||||||||||| || || || | ||| || ||||||||||| |
Sbjct 56668 GATTCCTTTTGAATGTTGTAATCCGACAGCGTTCTACCGTCTTCCAGTTGTTTACCAGCG 56727
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
| || | | ||||||||||||||| || ||||| ||||| |||||| || |
Sbjct 56728 AAAATCAACCTCTGTTGGTCCGGAGGAATGCCTTCCTTGTCCTGGATTTTGGACTTGACG 56787
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | || || | || || ||||| | || | || ||||||||||| || ||
Sbjct 56788 TTGTCGATAGTATCAGAAGATTCGACCTCCAAAGTAATAGTCTTACCAGTCAGTGTCTTG 56847
Query 138601 ACAAAAATCTGCAT 138614
|| ||||| |||||
Sbjct 56848 ACGAAAATTTGCAT 56861
>seq20
Length=304555
Score = 87.8 bits (96), Expect = 2e-12
Identities = 159/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | ||| || || |||| | ||||||||||| ||||||||||| |
Sbjct 8897 CCACCTCTCAATCTCAAGACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 8838
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| | ||| || | ||| ||||| | | |||| | | |||||||| || ||
Sbjct 8837 AAAGTTCTGCCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 8778
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565
|||||||| ||||| ||| | || | || |||| || | |||||| | || || |
Sbjct 8777 ATACCTTCCTTGTC-TTGAATCTTAGACTTGACATTG-TCAATGGTGTCTGAAGATTCAA 8720
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
| || | || | || ||||| || | ||| || || ||||| |||||
Sbjct 8719 CTTCAAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 8671
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496262058819600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |