Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242635.1_202017-08-07] 55 sequences; 11,656,823 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq13 105 7e-18 seq26 104 2e-17 seq17 98.7 1e-15 seq20 87.8 2e-12 >seq13 Length=154029 Score = 105 bits (116), Expect = 7e-18 Identities = 158/221 (71%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | ||| |||||||||| | || |||||||| ||||||||||| | Sbjct 46849 CCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAC 46790 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | ||| || | ||| ||||| | | |||||| | |||||||| ||||| Sbjct 46789 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAGGG 46730 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 |||||||| ||||| ||| | |||| || |||| || | ||||| | || || | Sbjct 46729 ATACCTTCCTTGTC-TTGAATCTTTGACTTGACATTG-TCAATAGTGTCAGAAGATTCAA 46672 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAA 138606 | || | || | || |||||||||| |||||| |||||| Sbjct 46671 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTTTTGACAAAA 46631 >seq26 Length=194426 Score = 104 bits (114), Expect = 2e-17 Identities = 157/220 (71%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | ||| |||||||||| | || ||||||||||||||||||||| | Sbjct 158875 CCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGAC 158934 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | ||| || | ||| ||||| | | |||| | | |||||||| || || Sbjct 158935 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 158994 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTT--AATTGTTCCACGGTGTCGGTCGACTCCA 138565 |||||||||||||| ||| | || | ||| |||| || | |||||| | || || | Sbjct 158995 ATACCTTCTTTGTC-TTGAATCTTGGATTTGACATTG-TCAATGGTGTCAGAAGATTCAA 159052 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAA 138605 | || | || | || |||||||||| ||| || || || Sbjct 159053 CTTCTAGAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 159092 >seq17 Length=83854 Score = 98.7 bits (108), Expect = 1e-15 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||| |||||||||||||| || | || | ||| || ||||||||||| | Sbjct 56212 GACTCTTTTTGAATGTTGTAATCCGATAGCGTTCTACCGTCTTCCAGTTGTTTACCAGCG 56271 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 | || | | ||||||||||||||| |||||||| ||||| ||| || || | Sbjct 56272 AAAATCAACCTCTGTTGGTCCGGAGGAATACCTTCCTTGTCCTGGATCTTAGACTTGACG 56331 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | | || ||||| | || | || ||||| ||||||||||| Sbjct 56332 TTATCGATGGTGTCAGAATATTCAACCTCCAAGGTTATGGTCTTACCGGTCAGAGTTTTG 56391 Query 138601 ACAAAAATCTGCAT 138614 |||||||||||||| Sbjct 56392 ACAAAAATCTGCAT 56405 Score = 93.3 bits (102), Expect = 4e-14 Identities = 139/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||||||||||||||| || || || | || || | |||||||| | | Sbjct 56440 GATTCCTTTTGAATGTTGTAATCCGACAGCGTTCTACCATCTTCCAACTGTTTACCTGCA 56499 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 | || | | ||||||||| || || |||||||| ||||| ||| || || | | Sbjct 56500 AAAATCAATCTCTGTTGGTCTGGTGGAATACCTTCCTTGTCCTGGATCTTACTCTTCACA 56559 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 |||| | | |||||| | || || ||||| | || | || |||||||| |||||||| Sbjct 56560 TTGT-CTATGGTGTCAGAAGATTCGACCTCCAAAGTGATAGTCTTACCAGTTAGAGTTTT 56618 Query 138600 TACAAAAATCTGCAT 138614 |||||||||||||| Sbjct 56619 GACAAAAATCTGCAT 56633 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || |||||||||||||| ||||| || || | || || |||||||| || | | Sbjct 55984 GATTCCTTTTGAATGTTATAGTCTGACAGCGTTCTACCATCTTCCAGTTGTTTCCCTGCA 56043 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGAT-TTTTTGTTTTAA 138539 | || | | ||||||||| || || |||||||| ||||| ||| || | || | Sbjct 56044 AAAATCAATCTCTGTTGGTCTGGTGGAATACCTTCCTTGTCCTGGATCTTACTCTTCACA 56103 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | |||||| | || || ||||| | || | || |||||||| | |||||| Sbjct 56104 TTG-TCTATGGTGTCAGAAGATTCGACCTCTAAAGTGATAGTCTTACCAGTTAAAGTTTT 56162 Query 138600 TACAAAAATCTGCAT 138614 |||||||| ||||| Sbjct 56163 GACAAAAATTTGCAT 56177 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||||||||||||||| || || || | ||| || ||||||||||| | Sbjct 56668 GATTCCTTTTGAATGTTGTAATCCGACAGCGTTCTACCGTCTTCCAGTTGTTTACCAGCG 56727 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 | || | | ||||||||||||||| || ||||| ||||| |||||| || | Sbjct 56728 AAAATCAACCTCTGTTGGTCCGGAGGAATGCCTTCCTTGTCCTGGATTTTGGACTTGACG 56787 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | || || | || || ||||| | || | || ||||||||||| || || Sbjct 56788 TTGTCGATAGTATCAGAAGATTCGACCTCCAAAGTAATAGTCTTACCAGTCAGTGTCTTG 56847 Query 138601 ACAAAAATCTGCAT 138614 || ||||| ||||| Sbjct 56848 ACGAAAATTTGCAT 56861 >seq20 Length=304555 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | ||| || || |||| | ||||||||||| ||||||||||| | Sbjct 8897 CCACCTCTCAATCTCAAGACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 8838 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| | ||| || | ||| ||||| | | |||| | | |||||||| || || Sbjct 8837 AAAGTTCTGCCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 8778 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 |||||||| ||||| ||| | || | || |||| || | |||||| | || || | Sbjct 8777 ATACCTTCCTTGTC-TTGAATCTTAGACTTGACATTG-TCAATGGTGTCTGAAGATTCAA 8720 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | || | || | || ||||| || | ||| || || ||||| ||||| Sbjct 8719 CTTCAAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 8671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262058819600