Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242635.1_202017-08-07]
55 sequences; 11,656,823 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq17 125 7e-24
seq28 100 3e-16
>seq17
Length=83854
Score = 125 bits (138), Expect = 7e-24
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964
||||| || | || |||||||||||||| |||||||| | ||| | | || ||
Sbjct 56197 ACCAAGTGAAGAGTGGACTCTTTTTGAATGTTGTAATCCGATAGCGTTCTACCGTCTTCC 56256
Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024
|| ||||| |||||| | ||||| | ||| || || ||||| || || ||||||||| |
Sbjct 56257 AGTTGTTTACCAGCGAAAATCAACCTCTGTTGGTCCGGAGGAATACCTTCCTTGTCCTGG 56316
Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084
|| || ||||| | |||| |||||| | | || || || | ||| | || ||
Sbjct 56317 ATCTTAGACTTGACGTTATCGATGGTGTCAGAATATTCAACCTCCAAGGTTATGGTCTTA 56376
Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|||||||||||||| ||||||||||||||
Sbjct 56377 CCGGTCAGAGTTTTGACAAAAATCTGCAT 56405
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| | || || | ||||| || | ||||| || |||||||| |||||||| |
Sbjct 56407 CCACCTCTTAGTCTTAGGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCCGAC 56466
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||| | | ||| || | |||||| || || | ||||||| ||| || || || ||
Sbjct 56467 AGCGTTCTACCATCTTCCAACTGTTTACCTGCAAAAATCAATCTCTGTTGGTCTGGTGGA 56526
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| || ||||||||| ||| || ||| | | || | |||||| | | |||||
Sbjct 56527 ATACCTTCCTTGTCCTGGATCTTACTCTTCACATTGTCTATGGTGTCAGAAGATTCGACC 56586
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | || | || || || || |||||||| ||||||||||||||
Sbjct 56587 TCCAAAGTGATAGTCTTACCAGTTAGAGTTTTGACAAAAATCTGCAT 56633
>seq28
Length=374213
Score = 100 bits (110), Expect = 3e-16
Identities = 291/441 (66%), Gaps = 13/441 (3%)
Strand=Plus/Plus
Query 47143 TGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTT 47202
|| |||| |||||| | |||| || ||||||||||| || ||| || | || || |
Sbjct 39765 TGGTCGCGTTCGCCTCCATCGAAGGTGTCTTCTTCTCCGGGTCCTTCGCCTCCATCTTCT 39824
Query 47203 ACATGAAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAG 47262
|||| | | ||| | |||||||| | || || |||||| || |||| ||||
Sbjct 39825 GGTTGAAGAAAAGAGGTATGATGCCCGGTTTGACCTTCTCCAACGAACTGATCTGCAGAG 39884
Query 47263 ACGAAGGCCTGCACACCAACTTTGCCTGTCTCTACTAC-AACACTAGAGTCGATCAAAAG 47321
||||||| |||||||| ||||||||||| | | | | |||| || | | |||
Sbjct 39885 ACGAAGGTTTGCACACCGACTTTGCCTGTTTGTTGTTCGCCCACTTGA----AAAACAAG 39940
Query 47322 TTGGACGTGCCCACCGTCAGCGACATGTTTGCCGAAGCCGTCGCCATTG-AGATGGAGTT 47380
|||| ||| |||| | || | |||| ||||||| || | | | || |
Sbjct 39941 CCGGACCCAGCCATCGTCGAGAAAATCGTCACCGAGGCCGTCGAGATCGAACAAAGA-TA 39999
Query 47381 TTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGTA 47440
||| || || |||| | | || | || |||||||| || |||||| | ||
Sbjct 40000 CTTCCTAGACGCCTTGCCAGTCGCCTTGCTAGGTATGAACGCCGACTTGATGAACCAATA 40059
Query 47441 CATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTTACCACA- 47499
| |||| || ||||| ||| | || || | || || ||| ||||| ||| |||
Sbjct 40060 CGTCGAGTTCGTCGCAGACAGACT-CTTGGTCGCCTTCGGTA--ACAAGAAGTACTACAA 40116
Query 47500 --CCGAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTT 47557
||| || || ||||| || ||| | |||||||| | | || ||||||||||| ||
Sbjct 40117 GGTCGACAACCCCTTCGATTTCATGGAAAACATTTCCTTGGCCGGTAAGACCAACTTCTT 40176
Query 47558 CGAGAAGCGCGTCGGCGAATA 47578
||| ||| | ||| ||| ||
Sbjct 40177 CGAAAAGAGAGTCTCCGACTA 40197
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475500473093200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |