Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242635.1_202017-08-07]
55 sequences; 11,656,823 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq17 116 3e-21
seq26 111 1e-19
seq20 111 1e-19
seq13 104 2e-17
seq14 82.4 7e-11
>seq17
Length=83854
Score = 116 bits (128), Expect = 3e-21
Identities = 150/205 (73%), Gaps = 4/205 (2%)
Strand=Plus/Plus
Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGAC--GGTTTTAGAATCGTCCAATT 45195
|| || || ||||||||||| || ||||| | ||||| ||| || ||| |||| ||
Sbjct 55975 TGAAGGGTAGATTCCTTTTGAATGTTATAGT--CTGACAGCGTTCTACCATCTTCCAGTT 56032
Query 45196 GTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTT 45255
|||| ||||| | ||||||| || ||||| || ||||| ||||| || || || || |
Sbjct 56033 GTTTCCCTGCAAAAATCAATCTCTGTTGGTCTGGTGGAATACCTTCCTTGTCCTGGATCT 56092
Query 45256 TTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGG 45315
| || | |||| |||||| ||||| ||||| || | ||| | || || || |
Sbjct 56093 TACTCTTCACATTGTCTATGGTGTCAGAAGATTCGACCTCTAAAGTGATAGTCTTACCAG 56152
Query 45316 TTAGAGTTTTTACAAAAATTTGCAT 45340
||| |||||| ||||||||||||||
Sbjct 56153 TTAAAGTTTTGACAAAAATTTGCAT 56177
Score = 114 bits (126), Expect = 1e-20
Identities = 147/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197
|| || || ||||||||||| || || ||||| | ||| || ||| ||||| |||
Sbjct 56431 TGAAGGGTAGATTCCTTTTGAATGTTGTAATCCGACAGCGTTCTACCATCTTCCAACTGT 56490
Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257
|| ||||| | ||||||| || ||||| || ||||| ||||| || || || || ||
Sbjct 56491 TTACCTGCAAAAATCAATCTCTGTTGGTCTGGTGGAATACCTTCCTTGTCCTGGATCTTA 56550
Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317
|| | |||| |||||| ||||| ||||| || | ||| | || || || |||
Sbjct 56551 CTCTTCACATTGTCTATGGTGTCAGAAGATTCGACCTCCAAAGTGATAGTCTTACCAGTT 56610
Query 45318 AGAGTTTTTACAAAAATTTGCAT 45340
|||||||| |||||||| |||||
Sbjct 56611 AGAGTTTTGACAAAAATCTGCAT 56633
Score = 104 bits (114), Expect = 2e-17
Identities = 147/204 (72%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197
|| || || ||||||||||| || || ||||| | ||| || || |||| ||||
Sbjct 56659 TGAAGAGTGGATTCCTTTTGAATGTTGTAATCCGACAGCGTTCTACCGTCTTCCAGTTGT 56718
Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257
|| || ||| | ||||| | || |||||||| ||||||||||| || || || |||||
Sbjct 56719 TTACCAGCGAAAATCAACCTCTGTTGGTCCGGAGGAATGCCTTCCTTGTCCTGGATTTTG 56778
Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316
|||| || | || | || || ||||| ||||| || | ||||| || || || ||
Sbjct 56779 GACTTGA-CGTTGTCGATAGTATCAGAAGATTCGACCTCCAAAGTAATAGTCTTACCAGT 56837
Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340
|| || || || |||||||||||
Sbjct 56838 CAGTGTCTTGACGAAAATTTGCAT 56861
>seq26
Length=194426
Score = 111 bits (122), Expect = 1e-19
Identities = 148/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| |||| ||| | || ||||||||||| || || || ||| | |||| ||
Sbjct 158887 CTCAAGACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGACAAGGTTCTACCG 158946
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||||||| || || || | ||||||| ||| ||||| || || || ||||||||
Sbjct 158947 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTTG 159006
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
|||||||| || ||||| || | |||||| ||||| || ||||| ||||| |
Sbjct 159007 TCTTGAATCTTGGATTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCTAGAGTGATG 159066
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAA 45331
|| || || || | ||| || || ||
Sbjct 159067 GTCTTACCAGTCAAAGTCTTAACGAA 159092
>seq20
Length=304555
Score = 111 bits (122), Expect = 1e-19
Identities = 154/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || | || | || || ||||||||||| || || || | ||| |
Sbjct 8885 CTCAAGACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCG 8826
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||||||| || || || | ||||||| ||| ||||| || ||||| ||||| ||
Sbjct 8825 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTG 8766
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
|||||||| || |||| || | |||||| ||||| || ||||| || ||||
Sbjct 8765 TCTTGAATCTTAGACTTGACATTGTCAATGGTGTCTGAAGATTCAACTTCAAGGGTAATA 8706
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
|| || ||||||| ||| || || ||||||||||||
Sbjct 8705 GTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATC 8670
>seq13
Length=154029
Score = 104 bits (114), Expect = 2e-17
Identities = 147/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| |||| ||| | || |||||||||||||| || || || | |||| ||
Sbjct 46837 CTCAAGACTAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCG 46778
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||||||| || || || | || |||| ||| ||||| || || || ||||| ||
Sbjct 46777 TCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAGGGATACCTTCCTTG 46718
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
|||||||| ||| |||| || | ||||| ||||| || ||||| | ||| |
Sbjct 46717 TCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATG 46658
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAA 45332
|| || || || | |||||| ||||||
Sbjct 46657 GTCTTACCAGTCAAAGTTTTGACAAAA 46631
>seq14
Length=143611
Score = 82.4 bits (90), Expect = 7e-11
Identities = 93/122 (76%), Gaps = 2/122 (2%)
Strand=Plus/Minus
Query 123595 AAACACAAGTCGAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAA 123654
|| ||||| |||||||| ||||| | |||| | ||||||||||| || ||||| || |
Sbjct 7726 AAGCACAAACAGAAACCGGTACGCCATTCATGGTTTACAAAGACGCTTGTAACAGAAAGA 7667
Query 123655 CCAATCAGAGCAACTTGGGAACAATAAAAT-GTAGTAATCTTTGCTCCGAAATTATCGAA 123713
|||| ||| |||||||| || || |||| || | ||||| || | |||||| ||||
Sbjct 7666 CCAACCAGCAAAACTTGGGTACTATCAAATCGTCG-AATCTGTGTTGCGAAATCGTCGAG 7608
Query 123714 TA 123715
||
Sbjct 7607 TA 7606
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452002889247800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |