Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242635.1_202017-08-07]
55 sequences; 11,656,823 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq4 165 1e-35
seq2 120 4e-22
>seq4
Length=235297
Score = 165 bits (182), Expect = 1e-35
Identities = 771/1211 (64%), Gaps = 36/1211 (3%)
Strand=Plus/Minus
Query 116062 TCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATAT 116121
|||||||| || || || || |||||||| || ||||| || || | || || || |||
Sbjct 178559 TCCCACATGTCGAATTGAAGTATACCTTGAGAAGCTGGAGAGCCTTGGAAGGTTTCGTAT 178500
Query 116122 GGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCA 116181
||||| || | || | || | || || | || || || ||||| || |||
Sbjct 178499 GGGCCATCTCTTTGAGCTAGCTCACAAGAGGCTTCCATGGAAGCATGGTACATGGTTTCA 178440
Query 116182 AAAATGCGAGCATTCATT--GCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAA 116239
|| || | ||| | | || | || || ||||| || || | | ||| |||| |
Sbjct 178439 AAGATTTGTATATTTAGTAAGCGT--GCTTCTTCGGAGTCGAATGGTAAACGCAACAACA 178382
Query 116240 TAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACT 116299
| || || || | |||||||||||| | |||| || | ||||||||||||||
Sbjct 178381 TGAAAGTGTCAGCCAAACCTTGGACACCCAAAGCAATCGGCCTGTGTCTCATATTAGATC 178322
Query 116300 TTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGA 116359
||| || ||| || |||||| | || | || ||||| | |||| || ||||
Sbjct 178321 TTCTTGCTTCCTCGACAGGATAATAGTTACGGTCAATAACGTTGTTTAAGTTACGAGTGA 178262
Query 116360 CAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCT------CTTCA- 116412
||| || | |||||||| ||||||| | | | | | | ||| | |||||
Sbjct 178261 TAACTTTAGAAATTTCATGTAGCTTTTTGAAGTTATATGTAGAAGTTTTGCCGTCTTCAG 178202
Query 116413 ---TTGACATACTTA--GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCT 116467
|| ||| | || | || | || |||| ||||| |||| ||||||||
Sbjct 178201 ATGTTTCAATAAATGCTGGCAAAGCAACAGAAGCCAAGTTACAAACAGCAGTCTCATCTG 178142
Query 116468 TATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCT 116527
| | | ||| || | |||||| ||||| || || ||| || ||||||||||
Sbjct 178141 GAGCGGAGTATTCAACAATTTCACAGCACAAGTTAGACGACTTGATAACACCCAAGTTCT 178082
Query 116528 TTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCG 116587
|||| || || || ||||||| ||||||||||| | | | | || || || || ||||
Sbjct 178081 TTTGGTTGGATTTCCTGTTACAAGCATCCTTGTAAACAACAAAGGGTGTACCAGTTTCCG 178022
Query 116588 TTTGGGACTTGAGAATAGCCTTCCATACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCC 116647
|||| | | | |||| | ||| | | ||| | ||| || | || |
Sbjct 178021 TTTGTGCTTCCAATATAGAGTACCACAATTTTTGGGCCTTGATAGTC---TTACCACGGC 177965
Query 116648 CCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCA--CAGCCTCTGAGAG 116705
| || | ||||| || || ||||| ||||| || ||||| ||| | || | ||
Sbjct 177964 CTTCTTTTTCGTAACGGGTATATAGGGCTTCAAATTCGTCACCGTAGCAGTCACTTA-AG 177906
Query 116706 CCCTGGTGCCTTATCT-GGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCA 116764
|| ||| ||| || | ||| |||| | || ||| || || || || |||||||
Sbjct 177905 CC-TGGAGCCG-ATGTAGGAGAGAATAAAGTCCAAGTGCCGTTTTCTTCGACACGCTTCA 177848
Query 116765 TGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCC 116824
|||| || || || | ||| || || | ||| | ||| | || |||||| | |
Sbjct 177847 TGAAAAGATCGGGAACCCATAGAGCTGGGAATAAATCTCTCGCACGGATTTCTTCCTTAC 177788
Query 116825 CCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACA 116884
| ||||| | | || | ||||| | |||||| |||||||| || |||| || |
Sbjct 177787 CGTGATTCTTTCTAATGTCGATGAAGTCGAAGATATCAGCGTGCCATGGCTCCAAATATA 177728
Query 116885 CCGCGATTGACCC------CTTGCGACGACCAGCCTGGTTTACATACCTCGCCGTTGCGT 116938
|| | | || |||| || ||| ||||| ||||| | || || ||
Sbjct 177727 GAGCAAAGGCACCAGGTCTCTTGTTACCACC---CTGGTCAACATAACGGGCAGTGTTGT 177671
Query 116939 TAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAG 116998
| || || || | ||| ||||| | || | ||| || || || || ||| ||
Sbjct 177670 TGAAGACACGGATCATAGGAATTAACCCGTTAGAAGTCCCGTTCGTACCAGCAATGTAAG 177611
Query 116999 ACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTT 117058
| | | || | | | ||| || || | ||||||||| || || || || ||
Sbjct 177610 AGCCGGTTGCACGAATGTTGTGAATATGTAGACCAATACCACCAGCAGTTTTGGAAATCA 177551
Query 117059 GTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGA 117118
|| || ||| | | | || ||||||| || || || || ||| |||| |||| | |
Sbjct 177550 AAGCACATTCCTTCAAAGTGTCGTAGATACCTTCAATGGAATCATCCTTCATTGCAACTA 177491
Query 117119 GGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGT 117178
|||| ||| |||||||| ||| ||||||||||||||||||| | ||||| | ||||
Sbjct 177490 GGAAACAGGAGGACATTTGAGGCTTTGGTGTACCAGCGTTGAATAAAGTTGGAGAGGCGT 177431
Query 117179 GGATGAACATACCTT-GGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCC 117237
|| || || || |||||||| | ||||| || | | | ||||| ||
Sbjct 177430 -GAGTAAAGTATTTTAGGGACATCAAGTTATAGGTTTCTAGAGCGGCCTCAATGTTATCA 177372
Query 117238 CCGTGAATACC 117248
|||||||||||
Sbjct 177371 CCGTGAATACC 177361
>seq2
Length=549560
Score = 120 bits (132), Expect = 4e-22
Identities = 138/186 (74%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 163353 CCAGTAGGTGTGTACGGTCGCGTGGCACCAAGATCTGGTCTCGCTGTGAAGAGCGGTATC 163412
||||| ||| |||||| | | || |||||||| || || || ||||| | ||||||
Sbjct 461626 CCAGTCGGTACCTACGGTAGAATCGCGCCAAGATCAGGCCTAGCAGTGAAAAACGGTATT 461685
Query 163413 CAAGTTGGTGCGGGTGTTGTGGATCCAGACTACACAGGTGAAGTCAAAGTCGTTCTCTTC 163472
||| ||||| |||||||| || ||||||||| ||||||||||| || | | ||
Sbjct 461686 CAAACGGGTGCTGGTGTTGTCGACAGAGACTACACCGGTGAAGTCAAGGTTATCTTATTT 461745
Query 163473 AATCACGGACACATGGATTTCCAAATCAAAAAGGGGGATCGCATCGCGCAACTCATCTTA 163532
||||| ||| | ||||||| |||||||| || ||||| ||||| ||| | |||||
Sbjct 461746 AATCATTCACAGAAGGATTTCGCGATCAAAAAAGGTGATCGTATCGCCCAATTGATCTTG 461805
Query 163533 GAGAGG 163538
|| |||
Sbjct 461806 GAAAGG 461811
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613506778213800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |