Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242635.1_202017-08-07] 55 sequences; 11,656,823 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq4 96.9 6e-15 >seq4 Length=235297 Score = 96.9 bits (106), Expect = 6e-15 Identities = 416/649 (64%), Gaps = 14/649 (2%) Strand=Plus/Minus Query 203880 TTCTCAGATAGTACATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAG 203939 |||||| ||| ||||| ||||||||||| || |||| ||| ||||| | ||||| | Sbjct 179065 TTCTCAAATAATACATACCGGTCTTTAGACCTTTCTTCCAACCGTAGAAATGCATACTTG 179006 Query 203940 ACAGTTTGCTCA-CGTTGGGGTCGGCCATGTGAAT--GTTCAGAGACTGGCTTTGGTCGA 203996 || || | || ||||||| || | |||| |||| ||| ||| ||| |||| Sbjct 179005 TTAGCTTACCCATGGTTGGGGCACGCAA---GAATAAATTCAAAGAATGGGATTGATCGA 178949 Query 203997 TGAAAGGCGCCCGATCTGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCG 204056 || || || || || || ||||| || || || ||||| || ||||| ||||| || | Sbjct 178948 TGTAAACGGCACGGTCGGCTGCCATGTTAATGATAGTCTTTTGTGAAATTTCCCAAACAG 178889 Query 204057 TCTTGAACACGTCTCTGGTGTGTTGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTG 204115 |||| ||| ||| | | ||| || || | || | | || || || || || Sbjct 178888 TCTTATACAAATCTTTCAATTCTTGTGGTACGT-TTGGTAAACCTTGAATGGAACCATTT 178830 Query 204116 TCGGCCATCAGTCTCATCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGC 204175 | | || || | || | | || |||| || ||||| | || || ||| Sbjct 178829 TGTGTGATTAGATATTGCTTCATACCATCATCCCAAATACCCAAATCAACCAAATCACGC 178770 Query 204176 ACCAGGTGGGGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTG 204235 | | || || |||| || ||||| || || || || || | || | | ||| |||| Sbjct 178769 AGTAAGTATGGATTGACGACTTGAAATTCACCAGATAGAACACGACGAGAGTACATGTTG 178710 Query 204236 TTGGTGAATGGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGC 204295 || | ||||||||| |||||||| || |||||||| | ||| || || ||| Sbjct 178709 GAAGTAACTGGTTCGAAACACTCGTTGTAACCTAAAATCTGGGAAGTGGATGCAGTAGGC 178650 Query 204296 ATGGGAGCCAGGAGCAGGGAGTTGCGCACACCGT-ATTTTTG--GACCCTGCGCTTCAGA 204352 || || |||| | || ||||| | ||||| | || || | | | | ||| | Sbjct 178649 ATAGGTGCCATGGTCAAAGAGTTTCTAACACCATGCTTCATGATGTCATTTC---TCAAA 178593 Query 204353 GAGGTCCAGTCGTGCATCGCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCT 204412 | ||| || ||| | ||||| || ||||||||||||| |||| || ||| Sbjct 178592 GTATCCCAATCCCACATACCGTAAGGTTTTTCGTCCCACATGTCGAATTGAAGTATACCT 178533 Query 204413 TGACTGACTGGGCTGCCCTTGTACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCAC 204472 ||| |||| ||| | | | || || || ||| || || |||| || Sbjct 178532 TGAGAAGCTGGAGAGCCTTGGAAGGTTTCGTATGGGCCATCTCTTTGAGCTAGCTCACAA 178473 Query 204473 GAGGCGGCCATGGCGTGATAGTACATGGTCTCAAAGATCTGAACGTTTA 204521 ||||| |||||| || ||||||||| |||||||| || | |||| Sbjct 178472 GAGGCTTCCATGGAAGCATGGTACATGGTTTCAAAGATTTGTATATTTA 178424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795154653330800