Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242635.1_202017-08-07] 55 sequences; 11,656,823 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq28 273 2e-68 >seq28 Length=374213 Score = 273 bits (302), Expect = 2e-68 Identities = 569/836 (68%), Gaps = 21/836 (3%) Strand=Plus/Minus Query 132604 TTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGC 132663 ||||| || ||| || | || || || || || || || || ||||||||||| Sbjct 40203 TTTTGGTAGTCGGAGACTCTCTTTTCGAAGAAGTTGGTCTTACCGGCCAAGGAAATGTTT 40144 Query 132664 GTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTG---CCGATCAGGTCGACG 132720 ||| ||||| ||||||||| | ||||||| ||| || |||| ||| |||| Sbjct 40143 TCCATGAAATCGAAGGGGTTGTCGACCTTGTAGTACTTCTTGTTACCGA--AGG-CGACC 40087 Query 132721 AGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGC 132780 | || ||||| || |||||||||| |||||| ||| ||| || | || ||| Sbjct 40086 AAGAGTCTGTCTGCGACGAACTCGACGTATTGGTTCATCAAGTCGGCGTTCATACCTAGC 40027 Query 132781 AGACGC-ACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGAC 132839 | | || || |||| || || || | | ||| ||||| |||| || |||||||| Sbjct 40026 A-AGGCGACTGGCAAGGCGTCTAGGAAGTATCTTTGTTCGATCTCGACGGCCTCGGTGAC 39968 Query 132840 GATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGC 132899 ||||| | ||| || | | |||| | ||| || ||||| ||| || || Sbjct 39967 GATTTTCTCGACGATGGCTGGGTCCGGCTTGTTTTTCAAGTGGGCGAACAACAAACAGGC 39908 Query 132900 AAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGG 132959 ||||||| ||||| || ||||| ||| | || ||||||||| ||| ||||| ||||| Sbjct 39907 AAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAGTTCGTTGGAGAAGGTCAAACCGGG 39848 Query 132960 CATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCC 133019 ||| | || | ||| || | ||| || |||| |||||| || || |||||||| || Sbjct 39847 CATCATACCTCTTTTCTTCAACCAGAAGATGGAGGCGAAGGACCCGGAGAAGAAGACACC 39788 Query 133020 CTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTG--CTGGCGATC 133077 |||| || ||||| || ||||| | || |||||| ||| || | |||| ||| Sbjct 39787 TTCGATGGAGGCGAACGCGACCAGTCTTTCACCGAACAGGGCATCGGCGTCCTGG--ATC 39730 Query 133078 CAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAAC 133137 || | || |||||||||||||| || || || || || ||||||||||| ||| Sbjct 39729 CATCTAAGGGCCCATTCGGCCTTCTCGCAGATTTCTGGGATGGTGTCGATGGCGTTGAAC 39670 Query 133138 AAACGGAGTTTCTCTTCCGAGGAACGC---ACGTAGGTGTCGATGAGGGTCGAATACATT 133194 || | | | || |||| || | | |||||||||||| | || || || Sbjct 39669 AA--GAACTCGCT-TTCCTTGGGGTCCTTGATGTAGGTGTCGATCAACAAGGAGTAGGTT 39613 Query 133195 TCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACC 133254 || ||||| | |||||| || ||||| || || ||||| || | | ||||| | | Sbjct 39612 TCGGAGTGGATGTTCTCGATCGCGATCTGGAACCCGTAGAAACTCTTGGCCTCCGGGATC 39553 Query 133255 TGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCG 133314 || || || | ||| |||||||| |||||||||||||| |||||| ||||||| Sbjct 39552 TGGACCTCGGTGGAGAAGTTCTCGACCAAGTTTTCGTTGACGATACCGTCGGAGGCGGCG 39493 Query 133315 AAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCA---AGCGCTCCCAG 133371 || ||||| ||||| |||||| | ||||| ||||||| | | |||| Sbjct 39492 AAGAAGGCAAGCACTCTGGAGATGAAGAATCTTTCGTTTTCGTTCATTCTGTTGTTCCAG 39433 Query 133372 TCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGC 133427 ||| | |||||||||||| ||| | |||||| | ||||| || || |||||||| Sbjct 39432 TCGTGGATGTCCTTGGACAAGTCGATTTCCTCGGCAGTCCAGAAGGAGGCCTCGGC 39377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172456131200