Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242635.1_202017-08-07] 55 sequences; 11,656,823 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq4 181 1e-40 seq14 134 2e-26 >seq4 Length=235297 Score = 181 bits (200), Expect = 1e-40 Identities = 903/1428 (63%), Gaps = 34/1428 (2%) Strand=Plus/Minus Query 109714 TTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGT 109773 ||||| || ||||||||||| || || || ||| ||||| | || ||| Sbjct 178757 TTGACGACTTGAAATTCACCAGATAGAACACGACGAGAGTACATGTTGGAAGTAACTGGT 178698 Query 109774 TCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATG 109833 ||||||||||| |||| |||| || || | |||||| || || ||||| || |||||| Sbjct 178697 TCGAAACACTCGTTGTAACCTAAAATCTGGGAAGTGGATGCAGTAGGCATAGGTGCCATG 178638 Query 109834 AGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCACGCATTGCGTCCCAATCATAA 109893 | | ||||| | ||| | | || | | | | || | |||||||| | Sbjct 178637 GTCAAAGAGTTTCTAACACCATGCTTCATGATGTCATTTCTCAAAGTATCCCAATCCCAC 178578 Query 109894 CGACCACTAAATTTAGTCTCACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCA 109953 ||| ||| || || |||||||| || |||||||| ||| | || ||| Sbjct 178577 ATACCG-TAAGGTTTTTCG-----TCCCACATGTCGAATTGAAGTATACCTTGAGAAGCT 178524 Query 109954 GGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCT 110013 ||||| || | ||| | ||||| | || || | || | ||| | || || || Sbjct 178523 GGAGAGCCTTGGAAGGTTTCGTATGGGCCATCTCTTTGAGCTAGCTCACAAGAGGCTTCC 178464 Query 110014 AGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAG 110073 | | ||||| ||||| || ||||| || || ||| | | ||| | ||||| || Sbjct 178463 ATGGAAGCATGGTACATGGTTTCAAAGATTTGTATATTTAGTAAGCGTGCTTCTTCGGAG 178404 Query 110074 TCGAAGGGAAGACCACAAAGAATAAACACATCCGCTAGACCCTGAACACCGAGACCAATG 110133 ||||| || | || | | || || || || | ||| || ||||| | | |||| Sbjct 178403 TCGAATGGTAAACGCAACAACATGAAAGTGTCAGCCAAACCTTGGACACCCAAAGCAATC 178344 Query 110134 GGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATG 110193 || | || |||| ||||| | || || || || || ||| |||| ||||| || Sbjct 178343 GGCCTGTGTCTCATATTAGATCTTCTTGCTTCCTCGACAGGATAATAGTTACGGTCAATA 178284 Query 110194 ACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAG---TTTGTCGTAATC- 110249 || || | || || | | || | |||||||| || |||| || || Sbjct 178283 ACGTTGTTTAAGTTACGAGTGATAACTTTAGAAATTTCATGTAGCTTTTTGAAGTTATAT 178224 Query 110250 ---GAACGTTTT--CGTCTCCTTAT--TGACATATTTG--GGGAGAGCAATAGACGCAAG 110300 ||| ||||| ||||| | || | ||| || || | ||||| ||| || | Sbjct 178223 GTAGAA-GTTTTGCCGTCTTCAGATGTTTCAATAAATGCTGGCAAAGCAACAGAAGCCAA 178165 Query 110301 ATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGA 110360 || || |||| |||||| ||| ||| |||||| | |||||| |||||||| || Sbjct 178164 GTTACAAACAGCAGTCTCATCTGGAGCGGAGTATTCAACAATTTCACAGCACAAGTTAGA 178105 Query 110361 ACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAG 110420 ||| || |||||||||||||| || || ||||| ||| || |||||||| || | Sbjct 178104 CGACTTGATAACACCCAAGTTCTTTTGGTTGGATTTCCTGTTACAAGCATCCTTGTAAAC 178045 Query 110421 CATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATACATCGGCGGC 110480 | | || |||||||||||||| |||| | | || | | ||| | | ||| Sbjct 178044 AACAAAGGGTGTACCAGTTTCCGTTTGTGCTTCCAATATAGAGTACCACAATTTTTGGGC 177985 Query 110481 GGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTC 110540 || ||| ||| | | ||||| | ||||| ||| || | | | |||||||| Sbjct 177984 CTTGATAGTC---TTACCACGGCCTTCTTTTTCGTAACGGGTATATAGGGCTTCAAATTC 177928 Query 110541 CTGTCCGTACACATCAGAAAGACCCTTCGCCT-TGTCGGGACAGAAGAGGGACCAATTTC 110599 | ||||| ||| | || ||| ||| || | |||| | | |||| | | Sbjct 177927 GTCACCGTAGCAGTCACTTAAGCCTGGAGCCGATGTAGG-AGAGAATAAAGTCCAAGTGC 177869 Query 110600 CACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCAC 110659 | || || || | ||||||||| || || |||| ||| | || | ||| | || | Sbjct 177868 CGTTTTCTTCGACACGCTTCATGAAAAGATCGGGAACCCATAGAGCTGGGAATAAATCTC 177809 Query 110660 GGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCG 110719 ||| ||||| | ||| || || | | || | ||||| | |||||| | Sbjct 177808 TCGCACGGATTTCTTCCTTACCGTGATTCTTTCTAATGTCGATGAAGTCGAAGATATCAG 177749 Query 110720 AGTGCCATGGTTCGAGATAGACAGCGATGGATCC------CTTACGACGACCCGCCTGGT 110773 ||||||||| || | ||| | ||| | || || ||| || |||| |||| Sbjct 177748 CGTGCCATGGCTCCAAATATAGAGCAAAGGCACCAGGTCTCTTGTTACCACCC---TGGT 177692 Query 110774 TAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGAC 110833 |||||| || || ||| |||||||| | || ||||||||| | || | || | Sbjct 177691 CAACATAACGGGCAGTGTTGTTGAAGACACGGATCATAGGAATTAACCCGTTAGAAGTCC 177632 Query 110834 CATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATAC 110893 | || ||||| ||| || | |||||||||| ||| ||||| | |||||||| Sbjct 177631 CGTTCGTACCAGCAATGTAAGAGCCGGTTGCACGAATGTTGTGAATATGTAGACCAATAC 177572 Query 110894 CACCCGCCCACTTACTAATTTGTGCACACTCTGTGAGTGTACCATAAATACCATCAATCG 110953 |||| || || ||| ||||| || | | || | || ||||| ||||| | Sbjct 177571 CACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAAGTGTCGTAGATACCTTCAATGG 177512 Query 110954 AATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCAT 111013 |||| |||| | |||| ||| || || || ||||| ||||| || || || || | Sbjct 177511 AATCATCCTTCATTGCAACTAGGAAACAGGAGGACATTTGAGGCTTTGGTGTACCAGCGT 177452 Query 111014 TGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTGGGACATCTTGTTGTATGTGTCGA 111073 |||| | || || | || ||| | || | |||||||| ||| || || || | Sbjct 177451 TGAATAAAGTTGGAGAGGCGTGAGTAAAGTATTTTAGGGACATCAAGTTATAGGTTTCTA 177392 Query 111074 GTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAACTCGCATGA 111121 | |||| | | | |||||||||||| | ||| |||| ||||| Sbjct 177391 GAGCGGCCTCAATGTTATCACCGTGAATACCTAAGGCGACTCTCATGA 177344 >seq14 Length=143611 Score = 134 bits (148), Expect = 2e-26 Identities = 502/778 (65%), Gaps = 23/778 (3%) Strand=Plus/Plus Query 110373 ACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGT 110432 ||||||||| | ||| || | || ||| || || || || || | |||| |||| || Sbjct 7647 ACCCAAGTTTTGCTGGTTGGTCTTTCTGTTACAAGCGTCTTTGTAAACCATGAATGGCGT 7706 Query 110433 ACCAGTTTCCGTCTGTGACTTGAGA-ATGGCCTTCCATACATCGGCGGCGGGGACAGTTG 110491 ||| ||||| || |||| |||| | ||||| | ||| || | ||| || ||| Sbjct 7707 ACCGGTTTCTGTTTGTG-CTTGTAAGATGGCGTACCACACTTTTTGGGCCTTGATGGTT- 7764 Query 110492 CGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACA 110551 ||| | ||||||| ||||| |||||| | || || ||||| | || | | Sbjct 7765 --TTACCACGACCTTCTCTTTCGTAACGGGTGTATAGCTCTTCGAATTCTTCACCCCAAA 7822 Query 110552 CATCAGAAAGACCCTTCGC----CTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCC 110607 | || | ||| || |||| | | || |||| ||| ||| |||| Sbjct 7823 CGTCGTCCAAACCTGGGGCAGAACTTGGTG----AAAATAGGGTCCAGGCCCCATCCTCT 7878 Query 110608 TCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGA 110667 || || | ||||||||| || ||||||||||| | || | ||| | || | |||| Sbjct 7879 TCGACACGCTTCATGAAAAGATCAGGAATCCATAGGGCAGGGAACAAATCTCTTGCACGA 7938 Query 110668 GCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCAT 110727 ||||| | ||| || | | | || | |||||| | ||| || | |||||| Sbjct 7939 ATTTCTTCCTTACCATGAGTTTTTCTGATATCAACAAAGTCGAAGATGTCTGCATGCCAT 7998 Query 110728 GGTTCGA-GATA--GACA---GCGATGGATCCCTTACGACGACCCGCCTGGTTAACATAG 110781 || || | || | | || || || || ||| || ||| |||| || || Sbjct 7999 GGCTCCAAGAAAAGGGCAAAGGCACCGGGTCTCTTGTTACCACCT---TGGTCCACGTAA 8055 Query 110782 CGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTA 110841 ||||| ||| |||||| || | || ||| ||||| | |||| || ||| || ||| Sbjct 8056 CGTGCAGTGTTATTGAATACACGGATCATGGGAATCAACCCATTTGAAGTACCGTTGGTA 8115 Query 110842 CCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCC 110901 || ||| || ||| |||||| | || |||||| | ||||| |||||| || Sbjct 8116 CCTGCAATATAAGAGCCTGTGGAACGAATATTGTTGATATGAAGACCAACACCACCTGCA 8175 Query 110902 CACTTACTAATTTGTGCACACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCC 110961 ||| ||| ||||||||| | | || | |||||||| || || || || || Sbjct 8176 GTCTTGGAAATCATGGCACACTCTTTCAAAGTGTCGTAAATACCTTCGATGGAGTCGTCC 8235 Query 110962 TTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGT 111021 || ||||||| || || ||||||||||| ||||| | ||||| || ||||| || || Sbjct 8236 TTCATGGCAATCAGGAAACAAGAAGACATTTGAGGGTGTGGCGTACCGGCATTAAATAGA 8295 Query 111022 GTAGGTGTCGCATGAATGAACAGACCTTGGGACATCTTGTTGTATGTGTCGAGTGCGGAG 111081 || || | || ||| |||| | |||||| |||||| || | || |||| Sbjct 8296 GTGGGGGAAGCGTGAGTGAAGTATCTCAATGACATCAAGTTGTAAGTCTTCAGCACGGAC 8355 Query 111082 GGTACATCTTTACCGTGAATACCAATGGCAACTCGCATGAACATATATTGAGG-CGTT 111138 | || ||||||| ||||| | ||| || ||||||| || || ||| || |||| Sbjct 8356 TCGATGTCGCTACCGTGGATACCCAGGGCCACACGCATGACCAGATGTTGGGGACGTT 8413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975595079000