Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242635.1_202017-08-07] 55 sequences; 11,656,823 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq4 190 2e-43 seq14 188 8e-43 >seq4 Length=235297 Score = 190 bits (210), Expect = 2e-43 Identities = 879/1371 (64%), Gaps = 44/1371 (3%) Strand=Plus/Minus Query 105953 GGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCC 106012 ||||| || || || || | ||| || || || | ||||| || || ||||| |||||| Sbjct 178700 GGTTCGAAACACTCGTTGTAACCTAAAATCTGGGAAGTGGATGCAGTAGGCATAGGTGCC 178641 Query 106013 ATCA--AAAGACTGTTACGAAGACCCTTTTCCTTGATG-CGTTCCTTGAGAACATCCCAG 106069 || ||||| ||| | || ||| | | | ||||| | || || | | |||||| Sbjct 178640 ATGGTCAAAGA--GTTTCTAACACCATGCTTCATGATGTCATTTCTCAA-AGTATCCCAA 178584 Query 106070 TCGTAGTTGAGCTT--GGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACG 106127 || | | | | | ||||| | | ||||||| || |||||||| | ||||| || | Sbjct 178583 TCCCACAT-ACCGTAAGGTTTTTCGT-CCCACATGTCGAATTGAAGTATACCTTGAGAAG 178526 Query 106128 TGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCT 106187 ||||| || | || || || || | || | || ||| | ||||| || | Sbjct 178525 CTGGAGAGCCTTGGAAGGTTTCGTATGGGCCATCTCTTTGAGCTAGCTCACAAGAGGCTT 178466 Query 106188 CCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCA-TCTCCTTGGCTTCATCT 106246 ||| ||| || || ||||||||||||||||| | ||| | | | | ||||| || Sbjct 178465 CCATGGAAGCATGGTACATGGTTTCAAAGATTTGTATATTTAGTAAGCGT-GCTTCTTCG 178407 Query 106247 GAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCA 106306 || || |||| | || |||| || || || || | |||||| ||||||||| || Sbjct 178406 GAGTCGAATGGTAAACGCAACAACATGAAAGTGTCAGCCAAACCTTGGACACCCAAAGCA 178347 Query 106307 ATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCA 106366 || || ||||||| ||||||||| ||| || ||| || |||||| | || | |||| Sbjct 178346 ATCGGCCTGTGTCTCATATTAGATCTTCTTGCTTCCTCGACAGGATAATAGTTACGGTCA 178287 Query 106367 ATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCA 106426 || || ||||| || || | || || | |||||||| || |||| | | | Sbjct 178286 ATAACGTTGTTTAAGTTACGAGTGATAACTTTAGAAATTTCATGTAGCTTTTTGAAGTTA 178227 Query 106427 AAAGTGCGAGT------CTCTTCA----TTGACATACTT--TGGAAGGGCGATTGATGCC 106474 | || ||| |||||| || ||| | ||| | || | || ||| Sbjct 178226 TATGTAGAAGTTTTGCCGTCTTCAGATGTTTCAATAAATGCTGGCAAAGCAACAGAAGCC 178167 Query 106475 AAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTG 106534 || || |||||||| |||||||| | | | ||| || | |||||| |||||||| Sbjct 178166 AAGTTACAAACAGCAGTCTCATCTGGAGCGGAGTATTCAACAATTTCACAGCACAAGTTA 178107 Query 106535 GAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAG 106594 || ||| || ||||| ||||||||||| || |||| || ||||||||||| Sbjct 178106 GACGACTTGATAACACCCAAGTTCTTTTGGTTGGATTTCCTGTTACAAGCATCCTTGTAA 178047 Query 106595 AGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCAC-ACATCGGC 106653 | | |||| || || || ||||| |||| | | || | | |||| | | | Sbjct 178046 ACAACAAAGGGTGTACCAGTTTCCGTTTGTGCTTCCAATATAGAGTACCACAATTTTTGG 177987 Query 106654 GGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAA 106713 | || | || | || | || || || ||||| || || ||||||||||| Sbjct 177986 GCCTTG----ATAGTCTTACCACGGCCTTCTTTTTCGTAACGGGTATATAGGGCTTCAAA 177931 Query 106714 CTCCTCACCCACCGCGTCGGAGAGACCTGGTGCC-TTGTCTGGACAGAAAAGAGACCATT 106772 || ||||| ||| | ||||| ||| ||| ||| |||| | || ||| Sbjct 177930 TTCGTCACCGTAGCAGTCACTTAAGCCTGGAGCCGATGT-AGGAGAGAATAAAGTCCAAG 177872 Query 106773 GACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGAT 106832 || || || || |||||||||||||| || |||| ||| || | || || | || Sbjct 177871 TGCCGTTTTCTTCGACACGCTTCATGAAAAGATCGGGAACCCATAGAGCTGGGAATAAAT 177812 Query 106833 CTCT-ACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATA 106891 |||| ||| || ||||| | ||| || || || | || | ||| || | |||| Sbjct 177811 CTCTCGCACGGA-TTTCTTCCTTACCGTGATTCTTTCTAATGTCGATGAAGTCGAAGATA 177753 Query 106892 TCCGCGTGCCATGGCTC--AAGATAG----ACTGCGATAGATCCCTTTCGACGCCCAGCT 106945 || |||||||||||||| || |||| | || || || ||| | ||| | Sbjct 177752 TCAGCGTGCCATGGCTCCAAATATAGAGCAAAGGCACCAGGTCTCTTGTTA---CCACCC 177696 Query 106946 TGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGAT 107005 || | ||||| || || ||| ||| || || || | ||| ||||| | || | || Sbjct 177695 TGGTCAACATAACGGGCAGTGTTGTTGAAGACACGGATCATAGGAATTAACCCGTTAGAA 177636 Query 107006 TGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCA 107065 || || || || ||| ||| | || | | | || || || | ||| Sbjct 177635 GTCCCGTTCGTACCAGCAATGTAAGAGCCGGTTGCACGAATGTTGTGAATATGTAGACCA 177576 Query 107066 ATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTG 107125 ||||| ||||| || || || ||||| ||| | | ||| | |||||||| | Sbjct 177575 ATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAAGTGTCGTAGATACCTTCA 177516 Query 107126 ATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCA 107185 || || || ||||| | || | ||||| || |||||| || || ||||||||||| Sbjct 177515 ATGGAATCATCCTTCATTGCAACTAGGAAACAGGAGGACATTTGAGGCTTTGGTGTACCA 177456 Query 107186 GCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT-GGGACATCTTGTCGTATGT 107244 || ||||| | ||||| | |||||| | || || || |||||||| || || || Sbjct 177455 GCGTTGAATAAAGTTGGAGAGGCGTGAGT-AAAGTATTTTAGGGACATCAAGTTATAGGT 177397 Query 107245 CTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCAT 107295 || | | | ||||||| || ||||| || || | ||| || | ||| Sbjct 177396 TTCTAGAGCGGCCTCAATGTTATCACCGTGAATACCTAAGGCGACTCTCAT 177346 >seq14 Length=143611 Score = 188 bits (208), Expect = 8e-43 Identities = 904/1407 (64%), Gaps = 50/1407 (4%) Strand=Plus/Plus Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGA-TTTGTGCGGTGGA 105993 || ||||| | ||| ||||| || |||||||| | |||||||| |||| | || || Sbjct 7021 TACATGTTTGAAGTGACTGGTTCGAAACATTCATTGT-ACCCAAGAATTTGGGATGTAGA 7079 Query 105994 GGCTGTTGGCATTGGTGCCATCA--AAAGACTGTTACGAAGACCCTTTTCCTTGA---TG 106048 || ||||||||||| ||||| ||||| ||| | | |||| | | |||| || Sbjct 7080 AGCGGTTGGCATTGGGGCCATGGTTAAAGA--GTTTCTTA-ACCCATGT--TTGACAATG 7134 Query 106049 CGTTCCTTGAGAACATCCCAGTCGTAGTTGAGCT--TGGTTTCACCTTCCCACATATCAA 106106 | ||| | | ||||| || | | | | ||| || | |||| |||| || | Sbjct 7135 TCCTTCTTTAAAGTGTCCCAATCCCACAT-ACCAAATGGCTTAGCATTCC-ACATGTCGA 7192 Query 106107 ATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTT 106166 |||| | | || | || | ||||| || ||||| || ||| ||||| || Sbjct 7193 ATTGTAAAATACCCTTAGAGGCAGGAGAGCCTTCAAAAGTGGAATATTTACCTTCCTTTT 7252 Query 106167 CAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCAT 106226 ||| |||||||| || || |||| || || || || ||||| || || | || Sbjct 7253 GAGCTAATTCACAAGAAGCTTCAAGGGTGGCATGGTAAATAGTTTCGAAAATTTGCTTAT 7312 Query 106227 TCATCTCCTTG-GCTTCATCTGAATCAAATGCGTAGCGGCA-CAAAATAAATACATCCGC 106284 | | | ||| |||| || | ||||||| ||| ||| || ||| | ||| || Sbjct 7313 TAAG-TATTTGAGCTTTTTCACATTCAAATG-GTAAACGCAGCATCATATAGGTATCGGC 7370 Query 106285 GAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC 106344 | ||||||||| |||| ||||||||||||||| ||||||||| |||| || ||| Sbjct 7371 CAAACCTTGAACCCCCAGGGCAATAGGTCTGTGTCTCATATTAGAGTTTCTAGCC-TCTG 7429 Query 106345 A-ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGA 106403 || |||||| | || | ||| ||||||| || | || | || | | || | | Sbjct 7430 GCACTGGATAATAGTTACGGTCGATGACTCTATTCAAGTTATGAGTGATGACTTTAGCAA 7489 Query 106404 TTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCAT----TGA--------CAT 106451 | ||||| | ||| ||| | | ||| || | ||| ||| || Sbjct 7490 TATCATGTAAACTTTGGAAATTATATGTGGCTGTTTTACCATCCTCTGAAGTCTCTACAA 7549 Query 106452 ACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACT 106511 | ||| ||||| || || || || || |||||||| || ||||| | |||| Sbjct 7550 ATGCTGGTAGGGCAATGGAAGCTAAGTTACAAACAGCTGTTTCATCTGGGGAAGAATACT 7609 Query 106512 CTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCT 106571 | | ||||| ||||| || || || || || ||||| || | ||||| ||| Sbjct 7610 CGACGATTTCGCAACACAGATTCGACGATTTGATAGTACCCAAGTTTTGCTGGTTGGTCT 7669 Query 106572 TTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGA 106631 || |||| || || || ||||| | |||| | ||||| || || || || |||| |||| Sbjct 7670 TTCTGTTACAAGCGTCTTTGTAAACCATGAATGGCGTACCGGTTTCTGTTTGTG-CTTGT 7728 Query 106632 GA-ATTGCCTTCCACACATCGGCGGC-TGGTACAATGGCGTTGGCCCGTCCCTCCGCCTC 106689 | || || | |||||| | ||| | | |||| || | || || || || Sbjct 7729 AAGATGGCGTACCACACTTTTTGGGCCTTG----ATGGTTTTACCACGACCTTCTCTTTC 7784 Query 106690 GTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT 106749 ||| ||||| || |||| || || |||||| ||||| | |||||| || Sbjct 7785 GTAACGGGTGTATAGCTCTTCGAATTCTTCACCCCAAACGTCGTCCAAACCTGGGGCAGA 7844 Query 106750 GTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGG 106809 ||| | || || | ||| ||| |||| || || |||||||||||||| || || Sbjct 7845 ACTTGGTGAAAATAGGGTCCAGGCCCCATCCTCTTCGACACGCTTCATGAAAAGATCAGG 7904 Query 106810 AATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCG 106869 |||||| |||| | || | |||||| ||| ||||| | ||| || | || Sbjct 7905 AATCCATAGGGCAGGGAACAAATCTCTTGCACGAATTTCTTCCTTACCATGAGTTTTTCT 7964 Query 106870 TAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTC-AAGATAGACTGCGATAGATC 106928 | |||| || || | ||| || || ||||||||||| |||| | | || | | | Sbjct 7965 GATATCAACAAAGTCGAAGATGTCTGCATGCCATGGCTCCAAGAAA-AGGGCAAAGGCAC 8023 Query 106929 C----CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGC 106984 | || | | || | |||| | || || || || ||| || ||||| || | | Sbjct 8024 CGGGTCTCTTGTTACC-ACCTTGGTCCACGTAACGTGCAGTGTTATTGAATACACGGATC 8082 Query 106985 ATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTC 107044 || ||||| | |||| ||| ||| || || || |||| ||| ||| | Sbjct 8083 ATGGGAATCAACCCATTTGAAGTACCGTTGGTACCTGCAATATAAGAGCCTGTGGAACGA 8142 Query 107045 ACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTA 107104 | || | ||| || | |||| ||| || || ||| || || |||||||| | Sbjct 8143 ATATTGTTGATATGAAGACCAACACCACCTGCAGTCTTGGAAATCATGGCACACTCTTTC 8202 Query 107105 AGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGAC 107164 | ||| | || ||||| | ||| ||||| ||||| |||| || ||||| ||| ||| Sbjct 8203 AAAGTGTCGTAAATACCTTCGATGGAGTCGTCCTTCATGGCAATCAGGAAACAAGAAGAC 8262 Query 107165 ATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT 107224 || || || ||| ||||| ||||| || || || || | |||||| |||| || || Sbjct 8263 ATTTGAGGGTGTGGCGTACCGGCATTAAATAGAGTGGGGGAAGCGTGAGTGAAG-TATCT 8321 Query 107225 TGG-GACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGAT 107283 |||||| || ||| |||| || || || || ||||| |||||||| || | Sbjct 8322 CAATGACATCAAGTTGTAAGTCTTCAGCACGGACTCGATGTCGCTACCGTGGATACCCAG 8381 Query 107284 GGCCACACGCATAAACATGTATTGGGG 107310 |||||||||||| | || | |||||| Sbjct 8382 GGCCACACGCATGACCAGATGTTGGGG 8408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980394388200