Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242635.1_202017-08-07] 55 sequences; 11,656,823 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq17 158 1e-33 seq26 141 7e-29 seq13 136 3e-27 seq20 134 1e-26 >seq17 Length=83854 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||||| | || || || |||||||||||||| ||||| || |||||||| | Sbjct 56407 CCACCTCTTAGTCTTAGGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCCGAC 56466 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||||| |||| ||||| || ||||||||||| ||||| | |||||| || || ||| Sbjct 56467 AGCGTTCTACCATCTTCCAACTGTTTACCTGCAAAAATCAATCTCTGTTGGTCTGGTGGA 56526 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || || || || || || ||| | |||| |||||||| | ||| || Sbjct 56527 ATACCTTCCTTGTCCTGGATCTTACTCTTCACATTGTCTATGGTGTCAGAAGATTCGACC 56586 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | ||||| || || || |||| |||||| ||||| |||||||| Sbjct 56587 TCCAAAGTGATAGTCTTACCAGTTAGAGTTTTGACAAAAATCTGCAT 56633 Score = 141 bits (156), Expect = 7e-29 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 101239 ATTTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATC 101298 ||| || ||||||| | | || || |||||||||||||| ||||| || || || || Sbjct 55947 ATTGCCACCTCTTAGTCTCAGGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTATAGTC 56006 Query 101299 GGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGG 101358 | | ||||| |||| |||| ||| || |||||||| ||||| | |||||| || || Sbjct 56007 TGACAGCGTTCTACCATCTTCCAGTTGTTTCCCTGCAAAAATCAATCTCTGTTGGTCTGG 56066 Query 101359 CGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTC 101418 ||||| ||||| || || || || || || ||| | |||| |||||||| | ||| Sbjct 56067 TGGAATACCTTCCTTGTCCTGGATCTTACTCTTCACATTGTCTATGGTGTCAGAAGATTC 56126 Query 101419 CACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || | ||||| || || || ||||||||||| ||||| || ||||| Sbjct 56127 GACCTCTAAAGTGATAGTCTTACCAGTTAAAGTTTTGACAAAAATTTGCAT 56177 Score = 109 bits (120), Expect = 4e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||||| | || || || ||||| || ||||| ||||| || |||||||| | Sbjct 56635 CCACCTCTTAGCCTTAGGACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCCGAC 56694 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||||| | || |||| ||| ||||| || || ||||| | |||||| || || ||| Sbjct 56695 AGCGTTCTACCGTCTTCCAGTTGTTTACCAGCGAAAATCAACCTCTGTTGGTCCGGAGGA 56754 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||||||| || || || ||||| || || | || | ||| ||||| | ||| || Sbjct 56755 ATGCCTTCCTTGTCCTGGATTTTGGACTTGACGTTGTCGATAGTATCAGAAGATTCGACC 56814 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGT 101472 || | ||| | || || || || | || || || || || ||||| || Sbjct 56815 TCCAAAGTAATAGTCTTACCAGTCAGTGTCTTGACGAAAATTTGCATAGT 56864 >seq26 Length=194426 Score = 141 bits (156), Expect = 7e-29 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| || | || |||||||| | || ||||| ||||| || ||||| |||| Sbjct 158875 CCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGAC 158934 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||||| | || |||||||||||||| ||||| ||||| | ||||| || || || Sbjct 158935 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 158994 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || |||||||| |||||||| || ||| ||| | || | |||||||| | ||| ||| Sbjct 158995 ATACCTTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCAGAAGATTCAACT 159054 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAA 101460 || ||||||| || || || || ||||| || || || Sbjct 159055 TCTAGAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 159092 >seq13 Length=154029 Score = 136 bits (150), Expect = 3e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| || | || |||||||| | || ||||| ||||| || ||||| || | Sbjct 46849 CCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAC 46790 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||||| | || |||||||||||||| ||||| || || | ||||| || || || Sbjct 46789 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAGGG 46730 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || |||||||| ||| || ||| | || | ||||||||| | ||| ||| Sbjct 46729 ATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 46670 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAA 101460 || | ||||| || || || || |||||||| ||||| Sbjct 46669 TCCAAAGTGATGGTCTTACCAGTCAAAGTTTTGACAAA 46632 >seq20 Length=304555 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| || | || || || || | || || || ||||| || ||||| || | Sbjct 8897 CCACCTCTCAATCTCAAGACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 8838 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||||||| | || |||||||||||||| ||||| ||||| | ||||| || || ||| Sbjct 8837 AAAGTTCTGCCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 8778 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || |||||||| || || ||| | || | ||||| || | ||| ||| Sbjct 8777 ATACCTTCCTTGTCTTGAATCTTAGACTTGACATTGTCAATGGTGTCTGAAGATTCAACT 8718 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| || | || || ||||||||||| || || || || ||||| Sbjct 8717 TCAAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 8671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396278134369635