Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242635.1_202017-08-07]
55 sequences; 11,656,823 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq4 140 2e-28
seq14 120 2e-22
>seq4
Length=235297
Score = 140 bits (154), Expect = 2e-28
Identities = 316/473 (67%), Gaps = 4/473 (1%)
Strand=Plus/Minus
Query 25892 GGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATC 25951
||| |||||||| |||| | |||| || || || ||| || | ||| |||| |
Sbjct 177890 GGAGAGAATAAAGTCCAAGTGCCGTTTTCTTCGACACGCTTCATGAAAAGATCGGGAACC 177831
Query 25952 CACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGA 26011
|| | || |||||||||||||| | |||||||| || |||||||||||| | |
Sbjct 177830 CATAGAGCTGGGAATAAATCTCTCGCACGGATTTCTTCCTTACCGTGATTCTTTCTAATG 177771
Query 26012 TCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTT 26071
|| | ||| || || ||||| | ||||||||| || ||||| | |||||| ||| |
Sbjct 177770 TCGATGAAGTCGAAGATATCAGCGTGCCATGGCTCCAAATATAGAGCAAAGGCACCAGGT 177711
Query 26072 CTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGA 26131
|| || ||||| || || || || | ||||| | ||||| || | ||| |||
Sbjct 177710 CTCTTGTTACCACCCTGGTCAACATAACGGGCAGTGTTGTTGAAGACACGGATCATAGGA 177651
Query 26132 ACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCG 26191
| ||| || | ||| ||||| || | | ||| | || || || | | ||| | |
Sbjct 177650 ATTAACCCGTTAGAAGTCCCGTTCGTACCAGCAATGTAAGAGCCGGTTGCACGAATGTTG 177591
Query 26192 TGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATC--TGAAACTG 26249
||| ||| | ||| || |||||||| ||| ||||| ||||| || | ||| |
Sbjct 177590 TGAATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAA--G 177533
Query 26250 TATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATT 26309
| ||| | || |||| ||| |||| | |||||| | | || ||||| || || | ||
Sbjct 177532 TGTCGTAGATACCTTCAATGGAATCATCCTTCATTGCAACTAGGAAACAGGAGGACATTT 177473
Query 26310 GCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATAT 26362
| | | | ||| || | || ||||| || || | || |||||| | |||
Sbjct 177472 GAGGCTTTGGTGTACCAGCGTTGAATAAAGTTGGAGAGGCGTGAGTAAAGTAT 177420
>seq14
Length=143611
Score = 120 bits (132), Expect = 2e-22
Identities = 287/434 (66%), Gaps = 0/434 (0%)
Strand=Plus/Plus
Query 25930 CTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTC 25989
|| ||| || | ||| |||||||| | ||| || |||||||| || | ||||||||
Sbjct 7887 CTTCATGAAAAGATCAGGAATCCATAGGGCAGGGAACAAATCTCTTGCACGAATTTCTTC 7946
Query 25990 TTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAA 26049
|| || ||| | ||| | | ||| | || || || || |||| |||||||| || ||
Sbjct 7947 CTTACCATGAGTTTTTCTGATATCAACAAAGTCGAAGATGTCTGCATGCCATGGCTCCAA 8006
Query 26050 ATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTC 26109
| | ||||| ||| ||| || |||||||| || ||||| | |||||| |
Sbjct 8007 GAAAAGGGCAAAGGCACCGGGTCTCTTGTTACCACCTTGGTCCACGTAACGTGCAGTGTT 8066
Query 26110 ATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTT 26169
|||||| || | ||| |||| || ||| ||||| ||||| || | ||| |
Sbjct 8067 ATTGAATACACGGATCATGGGAATCAACCCATTTGAAGTACCGTTGGTACCTGCAATATA 8126
Query 26170 GGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAAT 26229
|| ||||| || | ||||| || ||||| ||| | ||||| || || |||||
Sbjct 8127 AGAGCCTGTGGAACGAATATTGTTGATATGAAGACCAACACCACCTGCAGTCTTGGAAAT 8186
Query 26230 AGCTGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAA 26289
||||| ||| | || ||| |||| |||| ||| || | ||||| | |
Sbjct 8187 CATGGCACACTCTTTCAAAGTGTCGTAAATACCTTCGATGGAGTCGTCCTTCATGGCAAT 8246
Query 26290 TAAAAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGC 26349
| ||||||||||| | ||| | || | || || | |||||||| || || | |||
Sbjct 8247 CAGGAAACAAGAAGACATTTGAGGGTGTGGCGTACCGGCATTAAATAGAGTGGGGGAAGC 8306
Query 26350 ATGAGTATAATATC 26363
||||| | ||||
Sbjct 8307 GTGAGTGAAGTATC 8320
Score = 95.1 bits (104), Expect = 6e-15
Identities = 161/228 (71%), Gaps = 8/228 (4%)
Strand=Plus/Plus
Query 25048 GTTTGAAGTGAATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGT 25107
||||||||||| |||||| ||||||||||| | || | ||||| || ||||| || ||
Sbjct 7026 GTTTGAAGTGACTGGTTCGAAACATTCATTGTACCCAAGAATTTGGGATGTAGAAGCGGT 7085
Query 25108 TGGCATTAATGCTATTAATAGCGAATTTCTCAAACCATATTTAACAATCTCTTGTTTTAA 25167
||||||| || || || || ||||| || |||| ||| ||||| || | |||||
Sbjct 7086 TGGCATTGGGGCCATGGTTAAAGAGTTTCTTAACCCATGTTTGACAATGTCCTTCTTTAA 7145
Query 25168 TTTATCCCAATCTAAATTATTATCTAACTCGATATCGTTATCATATAAATCAAATTGTAA 25227
| |||||||| | || | | || || | || || || || ||||||||
Sbjct 7146 AGTGTCCCAATCCCACATACCAAATGGCT---TAGCATT-CCACAT--GTCGAATTGTAA 7199
Query 25228 CAATCCACTT-GCTGCAGGCGATTGATCAAAAGTTGAATATTTACCTT 25274
||| | ||| | ||||| || |||||||| |||||||||||||
Sbjct 7200 -AATACCCTTAGAGGCAGGAGAGCCTTCAAAAGTGGAATATTTACCTT 7246
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253039830384125
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |