Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242635.1_202017-08-07]
55 sequences; 11,656,823 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq4 224 3e-53
seq54 113 1e-19
seq11 93.3 1e-13
seq32 89.7 2e-12
>seq4
Length=235297
Score = 224 bits (248), Expect = 3e-53
Identities = 616/935 (66%), Gaps = 14/935 (1%)
Strand=Plus/Minus
Query 155587 CAATAGACGCCAGATTACATACCGCAGTCTCCT-TGTCGTCGCTGTATTCTACAATCTCA 155645
||| ||| |||| ||||| || |||||||| | || | || |||||| ||||| |||
Sbjct 178177 CAACAGAAGCCAAGTTACAAACAGCAGTCTCATCTGGAG-CGGAGTATTCAACAATTTCA 178119
Query 155646 CAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAA 155705
||||||| |||||| |||||| || || ||||| ||||| ||||| |||||||||
Sbjct 178118 CAGCACAAGTTAGACGACTTGATAACACCCAAGTTCTTTTGGTTGGATTTCCTGTTACAA 178059
Query 155706 GCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAG- 155764
||||||||||| | || | || || || || ||| | ||||| |||| || | ||
Sbjct 178058 GCATCCTTGTAAACAACAAAGGGTGTACCAGTTTCCGTTTGTGCTTCCA--ATATAGAGT 178001
Query 155765 -CCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTCATAT 155823
||| | | |||| || || ||| | |||||| || || |||
Sbjct 178000 ACCACAATTTTTGGGCCTTGATAGTCTTACCA---CGGCCTTCTTTTTCGTAACGGGTAT 177944
Query 155824 ACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGG-GCACTTATCGGGGCAA 155882
| || | | | || |||||||| || ||||| | || || || | | || | |
Sbjct 177943 ATAGGGCTTCAAATTCGTCACCGTAGCAGTCACTTAAGCCTGGAGCCGATGTAGGAG-AG 177885
Query 155883 AACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACATCACTCGCCCAAATA 155942
|| | | |||| | || | ||||||| ||| || | ||| |||| | |
Sbjct 177884 AATAAAGTCCAAGTGCCGTTTTCTTCGACACGCTTCATGAAAAGATCGGGAACCCATAGA 177825
Query 155943 GCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTCTAAG 156002
|| ||| | || || || || || | ||||||||||| | | || | |
Sbjct 177824 GCTGGGAATAAATCTCTCGCACGGATTTCTTCCTTACCGTGATTCTTTCTAATGTCGATG 177765
Query 156003 AATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTCTTG 156062
|| || ||||||| || |||||||| ||| | |||||| |||| ||||||
Sbjct 177764 AAGTCGAAGATATCAGCGTGCCATGGCTCCAAATATAGAGCAAAGGCACCAGGTCTCTTG 177705
Query 156063 ---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATA 156119
|||||||| || ||||| || ||||| || |||||||||| | ||||||||| |
Sbjct 177704 TTACCACCCTGGTCAACATAACGGGCAGTGTTGTTGAAGACACGGATCATAGGAATTAAC 177645
Query 156120 CCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATA 156179
|| || ||||| || || || || ||| | || || | || |||| || ||||||
Sbjct 177644 CCGTTAGAAGTCCCGTTCGTACCAGCAATGTAAGAGCCGGTTGCACGAATGTTGTGAATA 177585
Query 156180 TGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAA 156239
||||| ||||||||||| | ||| ||||| ||| |||||||| | ||| | | |
Sbjct 177584 TGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAAGTGTCGTAG 177525
Query 156240 ATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGT 156299
||||||||||| |||||||| | ||||| | ||| | || || | |||||| |
Sbjct 177524 ATACCTTCAATGGAATCATCCTTCATTGCAACTAGGAAACAGGAGGACATTTGAGGCTTT 177465
Query 156300 GGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACATATAA 156359
||||| ||||||||||||| || || | || ||| |||| || || ||||| |
Sbjct 177464 GGTGTACCAGCGTTGAATAAAGTTGGAGAGGCGTGAGTAAAGTATTTTAGGGACATCAAG 177405
Query 156360 TCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGAGACCCTCATC 156419
| || || || | ||||| ||| |||||||||| | | ||| |||||
Sbjct 177404 TTATAGGTTTCTAGAGCGGCCTCAATGTTATCACCGTGAATACCTAAGGCGACTCTCATG 177345
Query 156420 CACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATGCGCGTTCC 156479
| || || ||||| || ||| || | | || || | ||| | |||||
Sbjct 177344 ATTAAGTGTTGTGGACGTTCAGCAACTTGACCGTTGACTCTCAATAAGTACGAACGTTCT 177285
Query 156480 AGAGTTTTAAACCCGAAATAATCAAACAGAAAATC 156514
| ||||||||| ||||| ||| || |||||||
Sbjct 177284 AAAGTTTTAAAACCGAAGTAACTGTACTGAAAATC 177250
>seq54
Length=94118
Score = 113 bits (124), Expect = 1e-19
Identities = 110/142 (77%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 302539 TTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGC 302598
|||||| ||| | || ||| || ||| || ||||| | | |||| |||||||||
Sbjct 81986 TTTCTTGTGGTGTTGTCGTAATGAACCATGATATCTTCTAGAGCTTTGACTAAACGACGT 82045
Query 302599 TGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCC 302658
||||||||||| ||| || ||| || ||||| ||||| || ||||| |||||||||||
Sbjct 82046 TGAATATAACCTGTTTCAGCTGTCTTAACAGCAGTATCGATAAGACCTTCACGACCACCC 82105
Query 302659 ATAGCATGGAAGAATAGCTCTT 302680
|| ||||||||||| | |||||
Sbjct 82106 ATTGCATGGAAGAAAAACTCTT 82127
Score = 89.7 bits (98), Expect = 2e-12
Identities = 103/138 (75%), Gaps = 3/138 (2%)
Strand=Plus/Plus
Query 301815 AATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCAAA 301874
|||||| | | ||| |||||||| || || || |||||| || ||||| || ||
Sbjct 81247 AATTTCCTTTAAACGAGGAACACCGGAAGTGACTTT---CTTGGAAGCCACACCGGCGAA 81303
Query 301875 GTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATCAT 301934
|||||||||||||| || | ||| |||| ||||||||| || ||| || |||| |
Sbjct 81304 ATGGAAAGTATTCAGTGTCATTTGTGTAGCTGGCTCACCGATGGATTGAGCTGCAAGAAC 81363
Query 301935 ACCAACCATTTCTCCTGG 301952
|||||||||||| || ||
Sbjct 81364 ACCAACCATTTCACCAGG 81381
>seq11
Length=805687
Score = 93.3 bits (102), Expect = 1e-13
Identities = 301/461 (65%), Gaps = 10/461 (2%)
Strand=Plus/Plus
Query 233259 TTAAAAATGTTGTAGCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCA 233318
|||| |||| | |||||||| || |||||||||||||||||||||||||||| | |
Sbjct 364838 TTAAGAATGAAGCGGCACCGTGTGCGATCATACAATCACGTTCCATTTCACCAAATCTTA 364897
Query 233319 GACCACCATCATTTGACCTACCCTGGACTGTTTGACGAGTTAAAACAGTTCTTGGACCCT 233378
|||||| || |||| ||||| | || | ||| | |||||||| |||||||
Sbjct 364898 AACCACCGTCTCTTGATCTACCTTCCACCGGTTGTCTTGTTAAAACTTGCATTGGACCAC 364957
Query 233379 GAGCACGATAATTAATTTTATCTTTAACCATATGCTTCAGTCTCATATAATAACACGGAC 233438
| || | || ||| || || | |||||||| | | | ||||| ||||
Sbjct 364958 GGGCTCTGGCATGAATCTTGTCATCCACCATATGTCTTAAACGTTGGTAATATGTAGGAC 365017
Query 233439 CAATAAATAGTTCTGCGTGTAATTGTTCCCCAGATTCACCGCTGTATAAAACTTCATTAC 233498
||| || | || || ||||| || || | | ||| |||| | ||||||| |
Sbjct 365018 CAAAGAAGATTTGAGCCATTAATTTTTTACCTGTGTGACCATTGTACATAACTTCAAACC 365077
Query 233499 C-CGATGAATTGTAACCAATATCTTTTAATAGAGAACCAAATACCTGATGCTTTGGACCT 233557
| ||| || | ||||||| || ||||| | | ||||| | || |
Sbjct 365078 CACGA-GATTGGTAACCATGTTCACGTAATA-ATTTAGATATACCCTCTACTGT-----A 365130
Query 233558 TTATTAGCAAACGCAGTACAATCACCAAAACCACCATACGTCGCACACGCTTTACCCATT 233617
| | | ||| | || | |||||| |||| | ||| | | |||| || |
Sbjct 365131 ATGTCTGTAAATGGAGAAGCATCACCTTCGTTACCAGATAATGCAGCCACCTTACTCAAT 365190
Query 233618 AAAGTTTCTATCAACTGACCGATAGTCATTCTACTTGGTAGAGCGTGTGGATTGATAATT 233677
||| ||| || || || | | |||||| | | ||| | ||| || ||||||||||||
Sbjct 365191 AAACATTCGATTAAATGCGCCACAGTCATACGAGATGGAATAGCATGAGGATTGATAATT 365250
Query 233678 AAATCTGG-ACGTACTCCCTCCGATGTAAAAGGCATATCTT 233717
|||||||| ||| | || || | |||||| ||||||||||
Sbjct 365251 AAATCTGGTACG-ATACCTTCTGCTGTAAATGGCATATCTT 365290
Score = 91.5 bits (100), Expect = 4e-13
Identities = 370/571 (65%), Gaps = 14/571 (2%)
Strand=Plus/Plus
Query 251424 ACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTGGTGAAGCGAGA 251483
||| | ||| || ||| ||||||| ||||| || || | |||| ||| ||
Sbjct 364791 ACAAATATGAACTCTGAAAGCATCGGATGCTTCCATTAATCTTTCCTTTAAGAATGAAGC 364850
Query 251484 TGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCG 251543
|||||||||| |||||||||||||| ||||||||||| || | | |||||| || |
Sbjct 364851 GGCACCGTGTGCGATCATACAATCACGTTCCATTTCACCAAATCTTAAACCACCGTCTCT 364910
Query 251544 AGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATG 251603
| ||||| || | || || | || | | ||| ||||| || | | |||
Sbjct 364911 TGATCTACCTTCCACCGGTTGTCTTGTTAAAACTTGCATTGGACCACGGGCTCTGGCATG 364970
Query 251604 TTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGATGCT 251663
||| |||| |||||||| | | ||| ||||| ||| ||||| | |||||| |
Sbjct 364971 AATCTTGTCATCCACCATATGTCTTAAACGTTGGTAATATGTAGGACCAAAGAAGAT--T 365028
Query 251664 CGAAGGCATTTGCTCT---CCAGTTAGAGCGTTATACATAACTTCGTTTCCATTAGATTC 251720
|| | |||| | | || || || | || ||||||||||| ||| |||||
Sbjct 365029 TGA-GCCATTAATTTTTTACCTGTGTGACCATTGTACATAACTTCAAACCCACGAGATTG 365087
Query 251721 ATAACCAAGTTTCTGTAGCTCTGAAGCAATATCACCAATCTTGAATTTGCTAAAACTGGT 251780
|||||| ||| ||| | || ||| | | | || ||| | || || |||
Sbjct 365088 GTAACCATGTTCACGTAATAATTTAGATATACCCTCTA-CTGTAATGT-CTGTAAATGGA 365145
Query 251781 GCCG--TCTCCGTAAAGACCCATTTGAATCAAC-ACTTTGCCTAAAAGTGTCTCTTTCAG 251837
| | || || | ||| | | | || | || || | || | || | |
Sbjct 365146 GAAGCATCACCTTCGTTACC-AGATAATGCAGCCACCTTACTCAATAAACATTCGATTAA 365204
Query 251838 TTGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAG 251897
|| || | |||||||||| ||||||||||| |||||||| || | || ||| |
Sbjct 365205 ATGCGCCACAGTCATACGAGATGGAATAGCATGAGGATTGATAATTAAATCTGGTACGAT 365264
Query 251898 TCCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATA-ATGTTTCCAATAGTTCCCTTTT 251956
|| || || || || ||||||| ||| || | ||| || | |||||||| |||||||
Sbjct 365265 ACCTTCTGCTGTAAATGGCATAT-CTTCTCTACGATATGTGATACCAATAGTACCCTTTT 365323
Query 251957 GTCCGTGACGAGAACTGAACTTATCACCAAT 251987
| || ||||||||| ||| || ||||| ||
Sbjct 365324 GACCATGACGAGAAGCGAATTTGTCACCGAT 365354
Score = 91.5 bits (100), Expect = 4e-13
Identities = 133/188 (71%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 233273 GCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACCACCATCATTT 233332
||||| | |||||| | |||||| | |||||||||||| | | |||||||||||| |
Sbjct 471317 GCACCATAAGCAATGACACAATCTCTTTCCATTTCACCTAATCTCAGACCACCATCTCTA 471376
Query 233333 GACCTACCCTGGACTGTTTGACGAGTTAAAACAGTTCTTGGACCCTGAGCACGATAATTA 233392
|||||||| | | |||||| || || || | ||| ||||| |||| | |
Sbjct 471377 GACCTACCTTCAGTAGGTTGACGCGTCAAGACCGCTCTAGGACCACGAGCTCTTGCGTGC 471436
Query 233393 ATTTTATCTTTAACCATATGCTTCAGTCTCATATAATAACACGGACCAATAAATAGTTCT 233452
|| |||||| ||||||||||||| | | ||||||| || |||| ||| | | |
Sbjct 471437 ATCTTATCTAAGACCATATGCTTCAATTTTTGATAATAAATTGGCCCAAAAAAGATATAT 471496
Query 233453 GCGTGTAA 233460
|| |||||
Sbjct 471497 GCTTGTAA 471504
>seq32
Length=738159
Score = 89.7 bits (98), Expect = 2e-12
Identities = 247/378 (65%), Gaps = 3/378 (1%)
Strand=Plus/Plus
Query 288849 CCTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGC 288908
||||||||| ||||| | | ||| ||| || | || |||| || || || |
Sbjct 430436 CCTATCAAATCTACCGGGTCTTAATAAGGCTTTATCAAGGATGTCGGGCCTATTAGTACC 430495
Query 288909 TGCCAATACAACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGATT 288968
||||| ||||||| | || | | | |||| |||||||| || ||||||||
Sbjct 430496 AGCCAAGACAACAACATGATCAGCTGGAGTAAAACCATCCATTTCCACCAACATTTGATT 430555
Query 288969 AAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCttttttt 289028
| ||| | ||| ||||||||||| | |||| ||| ||| | || |||
Sbjct 430556 CAATGTGTTTTCTCTTTCATCATTAGCACCTGAAAAATTACC---TTTTTGTCTAGCTTT 430612
Query 289029 ACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGC 289088
|| | |||||||||||||||||| || | | | |||| |||| || ||| ||
Sbjct 430613 CCCGATAGCATCAATTTCGTCAATAAACACAATCGAAGGAGCGTTTTCCCTTGCAGTTTT 430672
Query 289089 AAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGC 289148
|| || |||||||| | | || || | ||| ||| ||||||| ||||| || ||| |
Sbjct 430673 GAACAAATCTCTTACCCTTGCAGCACCGACACCTACAAACATTTCAACAAACTCTGAACC 430732
Query 289149 GGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTT 289208
||| || | ||||| || || || || || ||| |||| || | || ||
Sbjct 430733 GGAAACAAAATAGAATGGGACGCCGGCCTCACCGGCGGTAGCCTTCGCAAGCAAGGTTTT 430792
Query 289209 ACCTGTTCCAGGTGGTCC 289226
||| || || ||||| ||
Sbjct 430793 ACCGGTACCTGGTGGACC 430810
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471816562828535
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