Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242635.1_202017-08-07] 55 sequences; 11,656,823 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq11 102 1e-16 >seq11 Length=805687 Score = 102 bits (112), Expect = 1e-16 Identities = 237/355 (67%), Gaps = 2/355 (1%) Strand=Plus/Minus Query 172400 AGAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTGT 172459 |||| | |||||| || | ||| | || ||| | || | ||| ||| |||||| Sbjct 225633 AGAATTATTATGGTTTGTAGCCGGTGCTACAGATGCTAATCTCTTATCTGAGCAAGGTGT 225574 Query 172460 TAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGAAAG 172519 ||| | ||| | | |||||| |||||||||| || ||| ||| | || || || Sbjct 225573 AAAAATCTGGGACGGTAATGGGTCTCGTGAATACTTGGATAAGATTGGGCTCACGGATAG 225514 Query 172520 AAAAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAATA 172579 ||||| ||| || | ||||| ||||||| || |||||||||||| || || ||||| Sbjct 225513 AAAAGTAGGAGACCTGGGCCCCGTTTATGGGTTCCAATGGAGACATTTCGGTGCCCAATA 225454 Query 172580 TATCGAC-TGTGATACAGATTACACAGGACAAGGAGTGGACCAATTAAGTCAAACTATTA 172638 | ||| || ||| || || || |||||||| | || || | | || ||| Sbjct 225453 CA-AGACGTGCGATGATGACTATACCGGACAAGGCATCGATCAGCTGAAGCAGGTTATAC 225395 Query 172639 ATACTTTACAAAACAACCCAGAAAGTAGAAGGATGTTAATTGATAGTTGGAATGTACCTC 172698 | | ||| ||| ||||| | ||||||||| | || | ||||||| | Sbjct 225394 ACAAATTAAAAACAAACCCTTACGATAGAAGGATCATCATGAGTGCTTGGAATCCTGCAG 225335 Query 172699 AACTTGATAAAATGGTTCTTCCTCCTTGCCATACTTTAGCACAATTTTATGTCAG 172753 | |||| || |||| | | || || ||||||| ||| |||| ||||||||||| Sbjct 225334 ATTTTGACAAGATGGCTTTACCACCATGCCATATTTTTTCACAGTTTTATGTCAG 225280 Score = 82.4 bits (90), Expect = 1e-10 Identities = 108/147 (73%), Gaps = 2/147 (1%) Strand=Plus/Minus Query 194242 CCTGAAATAGGGGATAAATTTTGTTCGGGA-ATGGCTCAAAAAGGAACTTGTGGTATGAT 194300 ||| |||| || || ||||| ||| | |||| |||||| || ||| |||||| | Sbjct 365360 CCTCAAATCGGTGACAAATTCGCTTCTCGTCATGG-TCAAAAGGGTACTATTGGTATCAC 365302 Query 194301 TTATTCACAAGAAGATATGCCATTTACAACTTCAGGTATGGTACCAGATATTATTATCAA 194360 ||| ||||||||||||||||||| | |||||| ||||||||| | |||||||| Sbjct 365301 ATATCGTAGAGAAGATATGCCATTTACAGCAGAAGGTATCGTACCAGATTTAATTATCAA 365242 Query 194361 TCCAAATTGTATTCCGTCCAGAATGAC 194387 ||| || |||||| || | ||||| Sbjct 365241 TCCTCATGCTATTCCATCTCGTATGAC 365215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632489165163400