Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242635.1_202017-08-07] 55 sequences; 11,656,823 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq17 143 2e-29 seq20 132 4e-26 seq26 125 6e-24 seq13 114 1e-20 >seq17 Length=83854 Score = 143 bits (158), Expect = 2e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | ||||| |||| ||||| ||||| || | || || ||| | | Sbjct 56177 ATGCAAATTTTTGTCAAAACTTTAACTGGTAAGACTATCACTTTAGAGGTCGAATCTTCT 56118 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| |||| | || || |||||||| ||||| ||||| || || || || ||| Sbjct 56117 GACACCATAGACAATGTGAAGAGTAAGATCCAGGACAAGGAAGGTATTCCACCAGACCAA 56058 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | ||||| ||||| |||||||| ||||| ||| |||| ||||||| |||||| Sbjct 56057 CAGAGATTGATTTTTGCAGGGAAACAACTGGAAGATGGTAGAACGCTGTCAGACTATAAC 55998 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 |||||||||||||| || || |||||||| Sbjct 55997 ATTCAAAAGGAATCTACCCTTCACTTGGT 55969 Score = 143 bits (158), Expect = 2e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | ||||| ||||| ||||| ||||| || | || || ||| | | Sbjct 56633 ATGCAGATTTTTGTCAAAACTCTAACTGGTAAGACTATCACTTTGGAGGTCGAATCTTCT 56574 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| |||| | || || |||||||| ||||| ||||| || || || || ||| Sbjct 56573 GACACCATAGACAATGTGAAGAGTAAGATCCAGGACAAGGAAGGTATTCCACCAGACCAA 56514 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | ||||| ||||| || |||||| |||| ||| |||| |||| ||||| ||| Sbjct 56513 CAGAGATTGATTTTTGCAGGTAAACAGTTGGAAGATGGTAGAACGCTGTCGGATTACAAC 56454 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 |||||||||||||| || || |||||||| Sbjct 56453 ATTCAAAAGGAATCTACCCTTCACTTGGT 56425 Score = 116 bits (128), Expect = 3e-21 Identities = 157/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 24698 GATACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAA 24757 || || ||||| || || | || || || || ||||| |||||||| | || || ||| Sbjct 56867 GACACTATGCAAATTTTCGTCAAGACACTGACTGGTAAGACTATTACTTTGGAGGTCGAA 56808 Query 24758 GCCACCGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCC 24816 | | || || | || |||| || | ||| ||||| ||||| ||||| || ||||| Sbjct 56807 TCTTCTGATACTATCGACAACGTCAAGTCCAAA-ATCCAGGACAAGGAAGGCATTCCTCC 56749 Query 24817 CGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGA 24876 || ||||| | ||||| || || || ||||| ||||| || |||| |||| || Sbjct 56748 GGACCAACAGAGGTTGATTTTCGCTGGTAAACAACTGGAAGACGGTAGAACGCTGTCGGA 56689 Query 24877 TTATAACATTCAAAAGGAATCGACACTACACTTGGT 24912 ||| ||||||||||||||||| || || |||||||| Sbjct 56688 TTACAACATTCAAAAGGAATCCACTCTTCACTTGGT 56653 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | ||||| || |||||||| || || || | || || ||| | Sbjct 56405 ATGCAGATTTTTGTCAAAACTCTGACCGGTAAGACCATAACCTTGGAGGTTGAATATTCT 56346 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| ||||| || ||||| || ||| Sbjct 56345 GACACCATCGATAACGTCAAGTCTAAGATCCAGGACAAGGAAGGTATTCCTCCGGACCAA 56286 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | ||||| || || || ||||| ||||| || |||| | || ||||| ||| Sbjct 56285 CAGAGGTTGATTTTCGCTGGTAAACAACTGGAAGACGGTAGAACGCTATCGGATTACAAC 56226 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 |||||||| || || || || |||||||| Sbjct 56225 ATTCAAAAAGAGTCCACTCTTCACTTGGT 56197 >seq20 Length=304555 Score = 132 bits (146), Expect = 4e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||| || || | || || |||||||||| |||||||| || ||||| ||| | | Sbjct 8670 GATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTTGAAGTTGAATCTTC 8729 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || ||||| |||||||| ||||| || || || || || Sbjct 8730 AGACACCATTGACAATGTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCACCTGACCA 8789 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 |||| | ||||||||||| || || || |||| || |||| |||| || || || Sbjct 8790 ACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCTGACTACAA 8849 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933 ||| |||||||| || || |||||||||| ||| ||||| | || || || Sbjct 8850 CATCCAAAAGGAGTCCACTTTACACTTGGTCTTGAGATTGAGAGGTGGTGG 8900 >seq26 Length=194426 Score = 125 bits (138), Expect = 6e-24 Identities = 156/214 (73%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 24717 TTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAA 24776 |||| || | || ||||| || || || || ||||| ||| | | ||||| | || | Sbjct 159088 TTAAGACTTTGACTGGTAAGACCATCACTCTAGAAGTTGAATCTTCTGACACCATTGACA 159029 Query 24777 CGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCT 24836 || ||| ||||| |||||||||||||| || || || || |||||| | ||||||| Sbjct 159028 ATGTCAAATCCAAGATTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATTGATCT 158969 Query 24837 TTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAAT 24896 |||| || || || |||| || |||| | |||| || || |||||||||||||||| Sbjct 158968 TTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAACATTCAAAAGGAAT 158909 Query 24897 CGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 | || |||| || || ||| ||||| | || || Sbjct 158908 CCACTTTACATTTAGTCTTGAGATTGAGAGGTGG 158875 >seq13 Length=154029 Score = 114 bits (126), Expect = 1e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 24713 TTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTA 24772 ||| | ||||| | || ||||| || || || | ||||| ||| | | ||||| | Sbjct 46632 TTTGTCAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 46691 Query 24773 GAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTG 24832 || | || || |||||| |||||||| ||||| || ||||| || |||||| | || Sbjct 46692 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCTCCTGACCAACAAAGATTA 46751 Query 24833 ATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAG 24892 |||||||| || || || |||| || |||| | |||| || || ||||| |||||| Sbjct 46752 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATCCAAAAG 46811 Query 24893 GAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| || |||| || || ||| ||||| | || || Sbjct 46812 GAATCCACTTTACATTTAGTCTTGAGATTGAGAGGTGG 46849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897290695400