Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242635.1_202017-08-07]
55 sequences; 11,656,823 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq17 91.5 1e-13
>seq17
Length=83854
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/231 (69%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| || || | ||| ||||||| ||||| ||| ||| || |||||||| || ||||||
Sbjct 56179 CCACCTCTTAGCCTTAGGACCAAGTGAAGAGTGGACTCTTTTTGAATGTTGTAATCCGAT 56238
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
|| | | | || |||||||| || || ||||| |||| | || ||||| | ||
Sbjct 56239 AGCGTTCTACCGTCTTCCAGTTGTTTACCAGCGAAAATCAACCTCTGTTGGTCCGGAGGA 56298
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTC 34926
| || |||||||| | || || |||||| ||||||| ||| ||
Sbjct 56299 ATACCTTCCTTGTCCTGGATCTTAGACTTGACGT----TATCGATGGTGTCAGAATATTC 56354
Query 34927 GACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || | |||||||||||| || || || || || ||||| ||||||||
Sbjct 56355 AACCTCCAAGGTTATGGTCTTACCGGTCAGAGTTTTGACAAAAATCTGCAT 56405
Score = 84.2 bits (92), Expect = 1e-11
Identities = 157/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 34747 ATTTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTC 34806
||| || || || | |||||||||| ||||| ||| ||||| ||||||||||||||
Sbjct 55947 ATTGCCACCTCTTAGTCTCAGGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTATAGTC 56006
Query 34807 CGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTG 34866
|| || | | |||| |||||||| || || || || |||| || || |||||| |
Sbjct 56007 TGACAGCGTTCTACCATCTTCCAGTTGTTTCCCTGCAAAAATCAATCTCTGTTGGTCTGG 56066
Query 34867 CGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTC 34926
|| | || |||||||| | || || || || |||| | ||| | ||
Sbjct 56067 TGGAATACCTTCCTTGTCCTGGATCTTACTCTTCACATTGTCTATGGTGTCAGAAGATTC 56126
Query 34927 GACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||| || | || || ||||| || || | || || ||||| || |||||
Sbjct 56127 GACCTCTAAAGTGATAGTCTTACCAGTTAAAGTTTTGACAAAAATTTGCAT 56177
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325692581684045
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |