Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242635.1_202017-08-07]
55 sequences; 11,656,823 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq17 141 7e-29
seq26 136 3e-27
seq20 116 3e-21
>seq17
Length=83854
Score = 141 bits (156), Expect = 7e-29
Identities = 159/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633
||| ||||| ||||| || ||||| |||||||||||||| || | | || | | |||
Sbjct 55965 CAGGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTATAGTCTGACAGCGTTCTACCATC 56024
Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693
|| |||||||| || ||| | |||||||| || || || || |||||||| || |||||
Sbjct 56025 TTCCAGTTGTTTCCCTGCAAAAATCAATCTCTGTTGGTCTGGTGGAATACCTTCCTTGTC 56084
Query 29694 TTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753
|| | || || ||| | |||| ||||||||| ||| || || | ||| |||||
Sbjct 56085 CTGGATCTTACTCTTCACATTGTCTATGGTGTCAGAAGATTCGACCTCTAAAGTGATAGT 56144
Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| |||||||| ||||| ||||| || |||||
Sbjct 56145 CTTACCAGTTAAAGTTTTGACAAAAATTTGCAT 56177
Score = 134 bits (148), Expect = 1e-26
Identities = 157/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634
|| ||||| ||||| || ||||| ||||||||||| ||||||| | || | | |||
Sbjct 56422 AGGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCCGACAGCGTTCTACCATCT 56481
Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694
|| | ||||| || ||| | |||||||| || || || || |||||||| || |||||
Sbjct 56482 TCCAACTGTTTACCTGCAAAAATCAATCTCTGTTGGTCTGGTGGAATACCTTCCTTGTCC 56541
Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754
|| | || || ||| | |||| ||||||||| ||| || || | ||| |||||
Sbjct 56542 TGGATCTTACTCTTCACATTGTCTATGGTGTCAGAAGATTCGACCTCCAAAGTGATAGTC 56601
Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| ||||||| ||||| ||||| ||||||||
Sbjct 56602 TTACCAGTTAGAGTTTTGACAAAAATCTGCAT 56633
Score = 125 bits (138), Expect = 6e-24
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634
|| ||||| ||||| ||||| |||||||||||||| ||||||| | || | | ||
Sbjct 56194 AGGACCAAGTGAAGAGTGGACTCTTTTTGAATGTTGTAATCCGATAGCGTTCTACCGTCT 56253
Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694
|| |||||||| ||||| | ||||| || || || ||||| |||||||| || |||||
Sbjct 56254 TCCAGTTGTTTACCAGCGAAAATCAACCTCTGTTGGTCCGGAGGAATACCTTCCTTGTCC 56313
Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754
|| | || ||||| | || | ||||||||| ||| || || | ||||| ||
Sbjct 56314 TGGATCTTAGACTTGACGTTATCGATGGTGTCAGAATATTCAACCTCCAAGGTTATGGTC 56373
Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || | ||||| ||||| ||||||||
Sbjct 56374 TTACCGGTCAGAGTTTTGACAAAAATCTGCAT 56405
Score = 122 bits (134), Expect = 7e-23
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634
|| ||||| ||||| |||||||| ||||||||||| ||||||| | || | | ||
Sbjct 56650 AGGACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCCGACAGCGTTCTACCGTCT 56709
Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694
|| |||||||| ||||| | ||||| || || || ||||| ||||| || || |||||
Sbjct 56710 TCCAGTTGTTTACCAGCGAAAATCAACCTCTGTTGGTCCGGAGGAATGCCTTCCTTGTCC 56769
Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754
|| | ||| ||||| | || | ||| |||||| ||| || || | ||| |||||
Sbjct 56770 TGGATTTTGGACTTGACGTTGTCGATAGTATCAGAAGATTCGACCTCCAAAGTAATAGTC 56829
Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| ||||| | || || || || || |||||
Sbjct 56830 TTACCAGTCAGTGTCTTGACGAAAATTTGCAT 56861
>seq26
Length=194426
Score = 136 bits (150), Expect = 3e-27
Identities = 163/219 (74%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || || ||||| | |||||||| ||||||||||| || || |
Sbjct 158875 CCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGAC 158934
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| | | || || | ||| || |||||| | ||||||||||| || || || ||
Sbjct 158935 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 158994
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
||||| ||||||||||| ||| || | ||||||| | || | ||||||||| ||| ||
Sbjct 158995 ATACCTTCTTTGTCTTG-AATCTTGGATTTGACATTGTCAATGGTGTCAGAAGATTCAAC 159053
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAA 29777
||| ||||| || || || ||||| || || ||||| ||
Sbjct 159054 TTCTAGAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 159092
>seq20
Length=304555
Score = 116 bits (128), Expect = 3e-21
Identities = 166/231 (72%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || ||||| || | ||||| || ||||| ||||| || || |
Sbjct 8897 CCACCTCTCAATCTCAAGACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 8838
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | || || | ||| || |||||| | ||||||||||| || || || |||
Sbjct 8837 AAAGTTCTGCCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 8778
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
||||| || |||||||| ||| || | |||||| | || | ||||| ||| ||| ||
Sbjct 8777 ATACCTTCCTTGTCTTG-AATCTTAGACTTGACATTGTCAATGGTGTCTGAAGATTCAAC 8719
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
|||||| || ||||| || || ||||| || || || || || ||||| ||
Sbjct 8718 TTCAAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 8668
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385218941782755
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |