Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242635.1_202017-08-07]
55 sequences; 11,656,823 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq28 89.7 5e-13
seq26 89.7 5e-13
seq17 89.7 5e-13
seq13 89.7 5e-13
>seq28
Length=374213
Score = 89.7 bits (98), Expect = 5e-13
Identities = 133/185 (72%), Gaps = 4/185 (2%)
Strand=Plus/Minus
Query 110710 GTGCTCGATGATATTATTGTTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACG-T 110768
|| ||||| | || | ||| ||||| |||||| ||| ||||| ||||| || || |
Sbjct 39535 GTTCTCGACCAAGTTTTCGTTGACGATACCGTCGGAGGCGGCGAAGAAGGCAAGCACTCT 39476
Query 110769 GTTTAAGAAAGAATCGTTCCTTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGG 110828
| | ||| ||||| ||| || ||||||| | | ||||||||||| | | ||||||||
Sbjct 39475 GGAGATGAA-GAATCTTTCGTTTTCGTTCATTCTGTTGTTCCAGTCGTGGATGTCCTTGG 39417
Query 110829 ACATGTCGATCTCTTCGACCTTCCAGTGACAATCGACCGCCTTCTTGTACGATTGCCAAA 110888
||| |||||| || ||| | ||||| | | | || |||||||||||||| |
Sbjct 39416 ACAAGTCGATTTCCTCGGCAGTCCAGAAGGAGGCCTCGGCACGCTTGTACGATTGCC--A 39359
Query 110889 GATCT 110893
|||||
Sbjct 39358 GATCT 39354
>seq26
Length=194426
Score = 89.7 bits (98), Expect = 5e-13
Identities = 153/220 (70%), Gaps = 4/220 (2%)
Strand=Plus/Minus
Query 25184 TTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAACGATACTATC 25243
|| || || || || || || || | ||||| | ||||| ||| | || || ||
Sbjct 159092 TTCGTTAAGACTTTGACTGGTAAGACCATCACTCTAGAAGTTGAATCTTCTGACACCATT 159033
Query 25244 GAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTC 25303
|| | || ||| || ||| || ||||| ||||| || || || || |||||| |
Sbjct 159032 GACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATTG 158973
Query 25304 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACAATATTCAAA 25361
|| | | || || ||| | ||||| | ||||| |||| ||| ||||| |||||||
Sbjct 158972 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTC--CGACTACAACATTCAAA 158915
Query 25362 AAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
| |||||||| | |||||||| || ||||||||||| ||
Sbjct 158914 AGGAATCCACTTTACATTTAGTCTTGAGATTGAGAGGTGG 158875
>seq17
Length=83854
Score = 89.7 bits (98), Expect = 5e-13
Identities = 165/240 (69%), Gaps = 4/240 (2%)
Strand=Plus/Minus
Query 25164 AATTAAACAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAG 25223
||||| ||| |||||| | || || || ||| | || || || | || || | || |
Sbjct 56872 AATTAGACACTATGCAAATTTTCGTCAAGACACTGACTGGTAAGACTATTACTTTGGAGG 56813
Query 25224 TCGAAGCCAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATAC 25283
||||| | ||||||||||| | || || ||||| || || || || || |
Sbjct 56812 TCGAATCTTCTGATACTATCGACAACGTCAAGTCCAAAATCCAGGACAAGGAAGGCATTC 56753
Query 25284 CGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA--ATGT 25341
| || || || || || | |||| || || |||||||| ||||| | ||||| |||
Sbjct 56752 CTCCGGACCAACAGAGGTTGATTTTCGCTGGTAAACAACTGGAAGACGGTAGAACGCTGT 56693
Query 25342 CAGCGATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
| |||||||| |||||||| |||||||| |||| || || |||| | ||||| ||
Sbjct 56692 C--GGATTACAACATTCAAAAGGAATCCACTCTTCACTTGGTCCTAAGGCTAAGAGGTGG 56635
>seq13
Length=154029
Score = 89.7 bits (98), Expect = 5e-13
Identities = 153/220 (70%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 25184 TTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAACGATACTATC 25243
||||| ||||| || || || || | ||||| | ||||| ||| | || |||||
Sbjct 46632 TTTGTCAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 46691
Query 25244 GAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTC 25303
|| | || || ||| ||| || || || ||||| || || || || |||||| |
Sbjct 46692 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCTCCTGACCAACAAAGATTA 46751
Query 25304 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACAATATTCAAA 25361
|| | | || || ||| | ||||| | ||||| |||| | | ||||| || ||||
Sbjct 46752 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTG--ACTACAACATCCAAA 46809
Query 25362 AAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
| |||||||| | |||||||| || ||||||||||| ||
Sbjct 46810 AGGAATCCACTTTACATTTAGTCTTGAGATTGAGAGGTGG 46849
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445094093997600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |